Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1287 113 4e-20 >seq1287 Length=463317 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||| || | ||| | || ||||| ||||| || || ||||| | Sbjct 101182 CCACCTCGCAGCCGCAGTACAAGATGAAGAGTGGACTCTTTTTGTATATTATAATCTGAC 101241 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || || || || || || || ||| |||| |||||||||||||| ||||| Sbjct 101242 AGGGTTCGGCCATCTTCGAGTTGTTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGA 101301 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||||||||| || ||||| ||| | | || | || || | | ||| | Sbjct 101302 ATTCCTTCTTTATCTTGAATTTTAGCCTTAACATTTTCGATGGTGTCTGAAGGCTCAACT 101361 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| |||||||| |||||||| || ||||| |||||||| Sbjct 101362 TCTAATGTAATCGTTTTACCAGTTAGAGTCTTGACGAAGATCTGCAT 101408 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 131019 ACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGA 131078 ||| || |||||||||| || || || || |||||||||||||| | || || Sbjct 102561 ACGAAGTACTAAATGTAAAGTAGATTCTTTCTGAATGTTGTAATCTGAAAGAGTACGGCC 102620 Query 131079 GTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTT 131138 || || |||||||| || || | ||||| | ||| ||||| ||||||||||||||||| Sbjct 102621 ATCTTCAAGCTGCTTTCCAGCAAATATTAATCTCTGTTGGTCTGGAGGGATTCCTTCTTT 102680 Query 131139 GTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198 ||| ||||| ||||| | || | || || | | ||| | || | |||| Sbjct 102681 GTCTTGAATTTTAGCCTTGACATTTTCGATTGTGTCAGAAGGCTCAACTTCCAATGTAAT 102740 Query 131199 GGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||||||| |||| |||||| || ||||| ||||| Sbjct 102741 TGTTTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 102776 Score = 104 bits (114), Expect = 2e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 131017 AAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGC 131076 ||||| || |||||||||| ||| || || || ||||| || ||||| | |||||| Sbjct 103015 AAACGAAGTACTAAATGTAAGGTTGATTCTTTCTGAATATTATAATCTGAAAGGGTGCGG 103074 Query 131077 GAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCT 131136 || || |||||||| || || | ||||| | ||| ||||| || || ||||||||| Sbjct 103075 CCATCTTCAAGCTGCTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGGGGAATTCCTTCT 103134 Query 131137 TTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTA 131196 ||||| |||||| ||||| | || | || || | | || | || | || Sbjct 103135 TTGTCTTGGATTTTAGCCTTGACATTTTCGATTGTGTCAGAAGGTTCAACTTCTAAAGTG 103194 Query 131197 ACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 | ||||| || || |||||||| || || ||||||||| || Sbjct 103195 ATTGTTTTGCCAGTAAGAGTTTTAACAAAGATCTGCATGCCT 103236 Score = 98.7 bits (108), Expect = 9e-16 Identities = 154/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 131019 ACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGA 131078 ||| || || | ||||| ||| || ||||||||||| |||||||| | ||| || Sbjct 100737 ACGAAGTACAAGATGTAAGGTGGATTCCTTTTGAATATTGTAATCTGAAAGGGTTCGGCC 100796 Query 131079 GTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTT 131138 || || |||||||| || || | || || | ||| || ||||| || ||||||||||| Sbjct 100797 ATCTTCAAGCTGCTTTCCAGCAAAAATCAATCTCTGTTGATCCGGTGGAATTCCTTCTTT 100856 Query 131139 GTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAA 131197 || ||| ||| |||| | | | ||| | |||||| | | ||| | || | || | Sbjct 100857 ATC-CTGAATTTTGGCTTTAACGTTCTCAATAGTATCAGATGGCTCAACTTCCAAAGTGA 100915 Query 131198 CGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || || || || |||||||| || ||||| |||||| Sbjct 100916 TAGTCTTTCCAGTGAGAGTTTTAACAAAAATTTGCATG 100953 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||| || | ||| | || ||||| |||||||| || ||||| Sbjct 102094 CCACCTCGCAGCCGCAGTACAAGATGAAGAGTGGACTCTTTTTGAATATTATAATCTGAA 102153 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| ||| || || || || || || || | ||||||||||||||||| || || Sbjct 102154 AGGGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAAATTAAACGCTGCTGGTCAGGGGGT 102213 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||||||||| || |||||| |||| | || | ||| || | | || | Sbjct 102214 ATTCCTTCTTTATCTTGAATTTTCGCTTTGACATTTTCAATAGTGTCAGATGGTTCAACT 102273 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || ||||| |||||||| || || || ||||| Sbjct 102274 TCCAGCGTGATTGTCTTGCCGGTAAGAGTTTTAACAAATATTTGCAT 102320 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || |||||||| |||||||| | || || || ||||||||||| ||||| Sbjct 102322 CCACCACGTAAACGCAGGACTAAATGAAGAGTAGATTCTTTTTGAATGTTATAATCAGAA 102381 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || |||||||| || || | || || | ||| || || |||||| Sbjct 102382 AGAGTACGTCCATCTTCAAGCTGCTTTCCAGCAAAAATCAATCTCTGTTGATCAGGAGGG 102441 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || ||| || ||| | | || | |||||| | | || | Sbjct 102442 ATACCTTCCTTATCTTGGATCTTTGCCTTCACATTTTCAATAGTATCTGAAGGTTCAACT 102501 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||||| || || |||||||| || ||||||||||| Sbjct 102502 TCCAGTGTGATTGTTTTGCCAGTCAGAGTTTTAACAAAAATCTGCAT 102548 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| |||| ||| || || | ||||| || || || ||||| || || |||||| Sbjct 100953 GCCACCTCGCAGACGAAGAACAAGATGTAATGTGGATTCTTTTTGGATATTATAATCGGA 101012 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || || ||||| || || || || | ||||| | ||| || || || || Sbjct 101013 GAGGGTACGACCATCTTCTAGTTGTTTACCAGCAAAAATTAATCTCTGTTGATCAGGTGG 101072 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||||||||| || ||||| ||| | | || | ||||| | | || | Sbjct 101073 AATTCCTTCTTTATCCTGAATTTTAGCCTTAACATTTTCAATGGTATCTGAAGGTTCAAC 101132 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||||| |||||| |||||||| ||||| Sbjct 101133 TTCCAGGGTGATGGTCTTGCCGGTTAAAGTTTTAACGAAAATTTGCAT 101180 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || | || ||| ||||| ||||||| || || || || ||||| || ||||| Sbjct 103233 GCCTCCTCTCAGACGAAGCACCAAATGTAATGTAGATTCTTTCTGAATATTATAATCTGA 103292 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| || || |||||||| || || | ||||| | ||| ||||| || || Sbjct 103293 AAGTGTGCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGGGG 103352 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||||||||| ||||| ||| | | || | || || | | ||| | Sbjct 103353 AATTCCTTCTTTGTCTTGAATTTTGGCCTTAACATTTTCTATTGTGTCAGAAGGCTCAAC 103412 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||||| ||||| || || || ||||| |||||||| Sbjct 103413 TTCTAATGTAATTGTTTTGCCGGTAAGTGTCTTGACGAAGATCTGCAT 103460 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 131019 ACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGA 131078 ||||| |||||||| | ||| || ||||| || ||||||||||| || ||| || Sbjct 100053 ACGCAAAACTAAATGCAGGGTTGATTCCTTCTGGATGTTGTAATCAGACAAGGTTCGGCC 100112 Query 131079 GTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTT 131138 || || || || || || || | || | | |||||| ||||| || ||||||||||| Sbjct 100113 ATCTTCAAGTTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCCGGTGGAATTCCTTCTTT 100172 Query 131139 GTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAA 131197 || ||| ||| |||| | | | || | ||| || | | || | || | || | Sbjct 100173 ATC-CTGAATTTTAGCTTTAACATTTTCAATAGTGTCAGAAGGTTCTACTTCTAGTGTGA 100231 Query 131198 CGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||||| ||||||| |||||| || ||||| ||||| Sbjct 100232 TTGTTTTTCCGGTTAAAGTTTTAACAAAAATTTGCAT 100268 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||||||||| || ||||| | || || ||||| |||||||||||||| Sbjct 100498 CCACCTCTCAAACGCAGGACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGAA 100557 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || || || || || || || || | || ||||| || || || || || Sbjct 100558 AGGGTTCGGCCATCTTCGAGTTGTTTTCCAGCAAAAATCAAACGTTGTTGATCTGGTGGA 100617 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||||||||| || ||||| ||| | | || | ||||| | | || | Sbjct 100618 ATTCCTTCTTTATCCTGAATTTTAGCCTTCACATTTTCAATGGTATCTGAAGGTTCAACT 100677 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || ||||| |||||||| || ||||| ||||| Sbjct 100678 TCCAGCGTGATTGTCTTGCCGGTAAGAGTTTTAACAAAAATTTGCAT 100724 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | || ||| | || | ||| | || || ||||| || || |||||||| | Sbjct 102778 CCACCTCTCAGACGTAAGACCAGATGAAGAGTAGATTCCTTCTGGATATTGTAATCTGAC 102837 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || || ||||| || ||||| || | || | | || ||||| || || Sbjct 102838 AAGGTACGGCCATCTTCTAGTTGTTTGCCAGCAAAAATCAGTCTTTGTTGGTCTGGTGGA 102897 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||||||||| || ||||| ||| | | || | || || | | ||| | Sbjct 102898 ATTCCTTCTTTATCTTGAATTTTGGCCTTAACATTTTCAATTGTGTCTGAAGGCTCAACT 102957 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | |||| ||||||||||||||||| || ||||| ||||||||| || Sbjct 102958 TCTAATGTAATTGTTTTACCGGTTAGAGTCTTGACGAAGATCTGCATGCCT 103008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471941006853120