Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq1287 89.7 4e-13 seq1631 84.2 2e-11 >seq1287 Length=463317 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/207 (70%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 16732 ATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTG 16791 |||||| || || ||||| || |||||||| || | || |||| | | || || | ||| Sbjct 100065 ATGCAGGGTTGATTCCTTCTGGATGTTGTAATCAGACAAGGTTCGGCCATCTTCAAGTTG 100124 Query 16792 TTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTT- 16850 ||| || ||| ||||||| | ||| || ||| || | || ||||| || ||||| Sbjct 100125 TTTCCCAGCAAAAATAAGTCTCTGCTGATCCGGTGGAATTCCTTCTTTATCCTGAATTTT 100184 Query 16851 -GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCG 16909 ||| || || | | | |||||| || || ||| | ||||| ||||||||| Sbjct 100185 AGCT--TTAACATTTTCAATAGTGTCAGAAGGTTCTACTTCTAGTGTGATTGTTTTTCCG 100242 Query 16910 GTCAGCGTTTTGACAAAAATCTGCATT 16936 || | ||||| |||||||| |||||| Sbjct 100243 GTTAAAGTTTTAACAAAAATTTGCATT 100269 Score = 82.4 bits (90), Expect = 6e-11 Identities = 160/234 (68%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | ||||| | |||||| ||||| || ||||| || ||||| || | Sbjct 101638 CCTCCACGAAGTCGAAGTACAAGATGCAGTGTGGATTCTTTTTGAATATTGTAATCAGAA 101697 Query 16769 ATGGTTTTGGCGTCC----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCAC 16824 | ||| |||||| ||||| ||||| || ||| | || |||| || || || Sbjct 101698 AGGGT----GCGTCCATCTTCCAACTGTTTTCCTGCAAAGATCAGCCTTTGCTGATCTGG 101753 Query 16825 AGGCACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGC 16882 || | || ||||| || ||||| ||| || || | | | |||||| || Sbjct 101754 CGGAATTCCTTCTTTATCCTGAATTTTAGCT--TTAACATTTTCAATAGTGTCAGAAGGT 101811 Query 16883 TCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 ||| ||| | || ||||||||||| || || || ||||||||||| |||||| Sbjct 101812 TCCACTTCTAATGTAATGGTTTTTCCTGTTAGTGTCTTGACAAAAATTTGCATT 101865 >seq1631 Length=286364 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/197 (70%), Gaps = 4/197 (2%) Strand=Plus/Minus Query 16748 TTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATA 16807 |||||||| ||||| || | | ||| | | || ||||||||||| || ||| ||||| Sbjct 119169 TTTTGTATATTGTAATCAGAGAGAGTTCTTCCATCTTCCAATTGTTTACCAGCAAAAATA 119110 Query 16808 AGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGC 16865 |||| |||||| || ||| | || |||||||| ||||| ||| ||||| | Sbjct 119109 AGCCTCTGTTGATCTGGAGGTATTCCTTCTTTGTCTTGAATTTTAGCT--TTCACATTTT 119052 Query 16866 CCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAA 16925 | | ||| || ||| || || | ||| |||||||| || || || || || || | Sbjct 119051 CGATAGTATCAGAGGGTTCTACCTCTAGGGTAATGGTTTTACCCGTGAGGGTCTTAACGA 118992 Query 16926 AAATCTGCATTTTGTAG 16942 | ||||||||| || || Sbjct 118991 AGATCTGCATTCTGAAG 118975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405027926462320