Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq2523 129 7e-25 seq53 118 1e-21 >seq2523 Length=169028 Score = 129 bits (142), Expect = 7e-25 Identities = 210/299 (70%), Gaps = 9/299 (3%) Strand=Plus/Minus Query 62638 AGGATAATAATTAATATCTATAATTTTATTGAGATTTC---TGACAATTACTTTGACCAC 62694 |||||||||||| || ||||| || ||||| ||||| | | |||| ||||| || Sbjct 121642 AGGATAATAATTTATGTCTATTATCTTATTTAGATTCCATGTAACAAC--CTTTGTT-AC 121586 Query 62695 ATCCTTCAGTTTGAGAAAATCAAA---TCGCCCATCTATTACAAACATGTTCAATGCAAC 62751 | | |||| || ||||||| | | || || | | ||| | | ||||||| Sbjct 121585 AGCTTTCAACTTTTCAAAATCACAGGTTTTATCAGCTTTCATAAATTTACTTAATGCAAT 121526 Query 62752 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 62811 ||||| | ||||||||| || | |||| | | | ||||| || || ||||| || Sbjct 121525 TGATGCTAAATTACAAACAGCAATTTCATCTGAAGAAGTATATTCAATAATTTCAGTACA 121466 Query 62812 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 62871 ||||||||||||||| || ||||||| ||||| ||||| || | || || | ||| Sbjct 121465 AAGATTACTACACTTAATAGTTCCTAGATTTTTCTGATTTGATTTCCTATTGCAAGAATC 121406 Query 62872 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA 62930 ||||| | ||| | || ||||||||||| |||||||| || || |||||||||| Sbjct 121405 TTTATACAACATGTAAGGTACACCAGTTTCAACTTGAGATTCAATGATAGCTTTCCAGA 121347 Score = 107 bits (118), Expect = 2e-18 Identities = 134/182 (74%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 62191 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62250 ||| |||||||| ||||| | |||||| | || ||||||||| || || ||||| | Sbjct 123317 TACCTGAAATTCACCAGAAAGTACTCTTCTTGTATAAATATTAGATGTGTATGGTTCAAA 123258 Query 62251 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62310 || |||||||| || |||||||||||||| || ||||| ||||| ||||| | | || Sbjct 123257 TGATTCATTATTGCCTAAAATTTGAGCAGTAGAAGCAGTTGGCATGGGTGCGATAAGCAA 123198 Query 62311 ACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGA 62368 | ||| | | || ||||| || ||||| ||||| | | |||||| ||||||| Sbjct 123197 AGAATTCCGTAATCC--ATGTTTTGAAATTTTTTCTTTCAATGCAGCCCAATCCCAAAGA 123140 Query 62369 TC 62370 || Sbjct 123139 TC 123138 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 63466 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATT 63525 |||| | ||| | ||||| || || || || || ||||| || |||||| || | ||| Sbjct 113586 AGTTGCAGCACTGAATAATGTGGGTGAGGCATGTGTAAAATATCCTTCAGAGAGCAAATT 113527 Query 63526 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 63585 ||| || | |||| | | ||||||||| ||| ||||| || || || | ||| || Sbjct 113526 GTATGTTTTAATAACAGCATCTATATCCTCACCATGGATTCCAACAGCAACCCTCATCAA 113467 Query 63586 CATGTGCTGAGGTCTTTCAAC 63606 |||||| |||||||||||||| Sbjct 113466 CATGTGTTGAGGTCTTTCAAC 113446 >seq53 Length=1573976 Score = 118 bits (130), Expect = 1e-21 Identities = 151/206 (73%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 32703 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 32762 || || ||||| || ||||| ||||| || || | ||| ||||||||||| || | ||| Sbjct 796304 TCATTTGAAAAGGTAAGTCCTGGCATGAGACCTCTCTTCTTAAGCCAAAAAATAGCAGCA 796245 Query 32763 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA 32822 || || |||||||||||||||||||| || || ||||| || | | |||||| ||| || Sbjct 796244 AAGGAGCCAGAAAAGAAAATTCCTTCAACAGCAGCAAACGCTACTATTCTCTCACCAAAA 796185 Query 32823 CCGGCGCTGTCA-TG--TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 32879 ||| || | || ||||| | |||||||| |||||||| || ||||| | Sbjct 796184 GTGGCCGTGGGACTGGAGATCCAAGAAAGTGCCCAATCAGCCTTCTTCTTAACACACTCC 796125 Query 32880 ATTGTCTCTATAGCATTAAAGAGATA 32905 || || || || ||||| || | ||| Sbjct 796124 ATGGTTTCGATGGCATTGAATAAATA 796099 Score = 105 bits (116), Expect = 8e-18 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 33147 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 33206 ||||| | ||| ||||| || | |||||||| ||||| || || ||||| ||||| ||| Sbjct 793942 TTAGAGAGATCAACTTCCTCAGCAGTCCAAAAGGATGCTTCAGCTTTTTTGTACATCTTC 793883 Query 33207 CAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGGATT 33266 || || |||||||||| |||||| ||||||||||| || |||| || | | ||||| Sbjct 793882 CATATATCATGATATTCAATTGGGAAAATAACAAACCTCCTTGGGTTATCTTTAAGGAGG 793823 Query 33267 GGTTCC 33272 |||||| Sbjct 793822 GGTTCC 793817 Score = 84.2 bits (92), Expect = 3e-11 Identities = 87/113 (77%), Gaps = 1/113 (1%) Strand=Plus/Minus Query 32476 CCAA-TTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAA 32534 |||| |||| || ||||||||| || |||||||| || ||| |||||||| |||||| Sbjct 796813 CCAAGTTCACCAAGCAATCTATCAGCAACAAATTCGATGTATTGTTTCATCAGATCACAA 796754 Query 32535 TTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAAT 32587 |||||||| || | |||||| || || |||| |||||||| || || || Sbjct 796753 TTCATTCCAATCATCGCAACTGGCAGCGCTTCAGTCAGAAATTCCTGCTCTAT 796701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633535624572800