Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1234 127 2e-24 seq550 127 2e-24 seq476 127 2e-24 seq486 125 8e-24 seq252 125 8e-24 seq91 116 4e-21 seq53 111 2e-19 seq1173 104 3e-17 seq63 104 3e-17 >seq1234 Length=583543 Score = 127 bits (140), Expect = 2e-24 Identities = 81/87 (93%), Gaps = 1/87 (1%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TCGGGAGCG 126323 |||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| Sbjct 27075 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATGGGAGCG 27016 Query 126324 TGGGTTCGAACCCCACACCTGACAAAT 126350 |||||||||||||||||||||||| || Sbjct 27015 TGGGTTCGAACCCCACACCTGACAGAT 26989 Score = 125 bits (138), Expect = 8e-24 Identities = 79/84 (94%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TCGGGAGCG 126323 |||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| Sbjct 71605 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATGGGAGCG 71664 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 |||||||||||||||||||||||| Sbjct 71665 TGGGTTCGAACCCCACACCTGACA 71688 >seq550 Length=1214699 Score = 127 bits (140), Expect = 2e-24 Identities = 87/96 (91%), Gaps = 3/96 (3%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TCGGGAGCG 126323 |||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| Sbjct 256278 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATGGGAGCG 256219 Query 126324 TGGGTTCGAACCCCACACCTGAC--AAATTATTATT 126357 ||||||||||||||||||||||| | ||| ||||| Sbjct 256218 TGGGTTCGAACCCCACACCTGACAGAGATTTTTATT 256183 >seq476 Length=819732 Score = 127 bits (140), Expect = 2e-24 Identities = 85/92 (92%), Gaps = 2/92 (2%) Strand=Plus/Minus Query 126258 TATTTACA-GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-T 126315 ||| |||| ||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct 567238 TATGTACAAGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGA 567179 Query 126316 CGGGAGCGTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||||||||||||||||| Sbjct 567178 TGGGAGCGTGGGTTCGAACCCCACACCTGACA 567147 Score = 116 bits (128), Expect = 4e-21 Identities = 77/84 (92%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT-CGGGAGCG 126323 |||||||||||||||| |||||||||||||||| |||||| |||||||||| |||| || Sbjct 581640 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGACTTAAGACCTGGTTCCCTAAGGGATCG 581581 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 |||||||||| ||||||||||||| Sbjct 581580 TGGGTTCGAATCCCACACCTGACA 581557 Score = 111 bits (122), Expect = 2e-19 Identities = 74/81 (91%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT-CGGGAGCGTGG 126326 ||||||||||||| |||||||||||||||| |||||| |||||||||| |||| ||||| Sbjct 581024 CAGGTTGGCCGAGCGGTCTAAGGCGCCAGACTTAAGACCTGGTTCCCTAAGGGATCGTGG 580965 Query 126327 GTTCGAACCCCACACCTGACA 126347 ||||||| ||||||||||||| Sbjct 580964 GTTCGAATCCCACACCTGACA 580944 >seq486 Length=414503 Score = 125 bits (138), Expect = 8e-24 Identities = 79/84 (94%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TCGGGAGCG 126323 |||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| Sbjct 298779 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATGGGAGCG 298720 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 |||||||||||||||||||||||| Sbjct 298719 TGGGTTCGAACCCCACACCTGACA 298696 Score = 125 bits (138), Expect = 8e-24 Identities = 79/84 (94%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TCGGGAGCG 126323 |||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| Sbjct 303953 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATGGGAGCG 304012 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 |||||||||||||||||||||||| Sbjct 304013 TGGGTTCGAACCCCACACCTGACA 304036 >seq252 Length=2458144 Score = 125 bits (138), Expect = 8e-24 Identities = 79/84 (94%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TCGGGAGCG 126323 |||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| Sbjct 2167238 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATGGGAGCG 2167297 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 |||||||||||||||||||||||| Sbjct 2167298 TGGGTTCGAACCCCACACCTGACA 2167321 >seq91 Length=3084333 Score = 116 bits (128), Expect = 4e-21 Identities = 77/84 (92%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT-CGGGAGCG 126323 |||||||||||||||| |||||||||||||||| |||||| |||||||||| |||| || Sbjct 2678537 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGACTTAAGACCTGGTTCCCTAAGGGATCG 2678478 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 |||||||||| ||||||||||||| Sbjct 2678477 TGGGTTCGAATCCCACACCTGACA 2678454 Score = 107 bits (118), Expect = 2e-18 Identities = 73/81 (90%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT-CGGGAGCGTGG 126326 ||||||||||||| ||||||||||||||||||||| |||||||||| |||| ||||| Sbjct 2679097 CAGGTTGGCCGAGCAGTCTAAGGCGCCAGATTTAAGCCCTGGTTCCCTAAGGGATCGTGG 2679038 Query 126327 GTTCGAACCCCACACCTGACA 126347 ||||||| ||||||||||||| Sbjct 2679037 GTTCGAATCCCACACCTGACA 2679017 >seq53 Length=1573976 Score = 111 bits (122), Expect = 2e-19 Identities = 94/116 (81%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 93581 TTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCC 93640 || || ||||| ||||| || |||||||||| |||||||| |||||||||||||| | | Sbjct 793942 TTAGAGAGATCAACTTCCTCAGCAGTCCAAAAGGATGCTTCAGCTTTTTTGTACATCTTC 793883 Query 93641 CATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAG 93696 ||||| || ||||||| |||||| || || ||||| | | ||||||||||| || Sbjct 793882 CATATATCATGATATTCAATTGGGAAAATAACAAACCTCCTTGGGTTATCTTTAAG 793827 Score = 98.7 bits (108), Expect = 1e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 93451 CTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGC 93510 ||| |||||||| ||||| || || |||||||||||||| ||||| ||||| ||||| || Sbjct 794171 CTGAACTTCTTGGGAAAACCTTTCCACGAGATTTTCATTAACTATGCCATCTGATGCAGC 794112 Query 93511 aaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAAT 93569 |||||||| | | ||| ||||||| ||| ||||| ||||| || ||||||| Sbjct 794111 GAAAAAAGCGAGGACATGAGAGATAAAATATTTTTCATCTGGCTTAAGTTTTTCCCAAT 794053 >seq1173 Length=132795 Score = 104 bits (114), Expect = 3e-17 Identities = 73/82 (89%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 126267 TCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TCGGGAGCGTG 126325 |||||||||||||| ||||||||||||| |||||||| ||||||||| |||| |||| Sbjct 15196 TCAGGTTGGCCGAGCGGTCTAAGGCGCCTGATTTAAGCCCTGGTTCCCGATGGGATCGTG 15137 Query 126326 GGTTCGAACCCCACACCTGACA 126347 |||||||| ||||||||||||| Sbjct 15136 GGTTCGAATCCCACACCTGACA 15115 >seq63 Length=712960 Score = 104 bits (114), Expect = 3e-17 Identities = 73/82 (89%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 126267 TCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TCGGGAGCGTG 126325 |||||||||||||| ||||||||||||| |||||||| ||||||||| |||| |||| Sbjct 681394 TCAGGTTGGCCGAGCGGTCTAAGGCGCCTGATTTAAGCCCTGGTTCCCGATGGGATCGTG 681335 Query 126326 GGTTCGAACCCCACACCTGACA 126347 |||||||| ||||||||||||| Sbjct 681334 GGTTCGAATCCCACACCTGACA 681313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556776101472320