Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq1287 125 6e-24 seq1631 105 6e-18 >seq1287 Length=463317 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||||||||| || ||||| | |||||||| ||||| ||| ||||| ||||| Sbjct 101180 ATGCAAATTTTCGTTAAAACTTTAACCGGCAAGACCATCACCCTGGAAGTTGAACCTTCA 101121 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | ||| | || || |||||| || |||||||| |||| |||||| Sbjct 101120 GATACCATTGAAAATGTTAAGGCTAAAATTCAGGATAAAGAAGGAATTCCACCTGATCAA 101061 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || || | |||| ||| || |||||| | |||||| | || | ||||||||||| Sbjct 101060 CAGAGATTAATTTTTGCTGGTAAACAACTAGAAGATGGTCGTACCCTCTCCGATTATAAT 101001 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415 || ||||||||||| ||| ||||| | || | |||||||| ||||||| Sbjct 101000 ATCCAAAAAGAATCCACATTACATCTTGTTCTTCGTCTGCGAGGTGGCA 100952 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 |||||||||||||||||| || | || || ||||||||||| | ||| |||||| Sbjct 101865 AATGCAAATTTTTGTCAAGACACTAACAGGAAAAACCATTACATTAGAAGTGGAACCTTC 101806 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 || || ||| | || ||| |||||| || |||||||| |||| ||||| Sbjct 101805 TGACACTATTGAAAATGTTAAAGCTAAAATTCAGGATAAAGAAGGAATTCCGCCAGATCA 101746 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 |||||||| || | ||| || ||||| ||||||||| || | | ||||| || Sbjct 101745 GCAAAGGCTGATCTTTGCAGGAAAACAGTTGGAAGATGGACGCACCCTTTCTGATTACAA 101686 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 ||| ||||||||||| ||||| ||| | || | || || || || || Sbjct 101685 TATTCAAAAAGAATCCACACTGCATCTTGTACTTCGACTTCGTGGAGG 101638 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 ||||||||||||||| ||||| | ||||| ||||| || || | ||| ||||| Sbjct 100269 AATGCAAATTTTTGTTAAAACTTTAACCGGAAAAACAATCACACTAGAAGTAGAACCTTC 100210 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 || || ||| | || ||| |||||| || |||||||| |||| ||||| Sbjct 100209 TGACACTATTGAAAATGTTAAAGCTAAAATTCAGGATAAAGAAGGAATTCCACCGGATCA 100150 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 || || ||||||| ||| || |||||| | |||||| ||| || | ||||| || Sbjct 100149 GCAGAGACTTATTTTTGCTGGGAAACAACTTGAAGATGGCCGAACCTTGTCTGATTACAA 100090 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCT 111404 || || || ||||| || || |||||||| |||||||| Sbjct 100089 CATCCAGAAGGAATCAACCCTGCATTTAGTTTTGCGTCT 100051 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 ||||||||||||||| ||||| | || || ||||| ||||| ||||| ||||| Sbjct 100497 AATGCAAATTTTTGTTAAAACTTTAACTGGGAAAACAATTACATTGGAAGTTGAACCATC 100438 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 ||| || ||| | || ||| |||||| || || ||||| |||| ||||| Sbjct 100437 AGATACTATTGAAAACGTTAAAGCTAAAATTCAGGATAAGGAAGGAATTCCTCCAGATCA 100378 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 || || | |||| ||| ||||||||||| |||||| || | | |||||||| Sbjct 100377 GCAGAGATTGATTTTTGCTGGCAAACAATTAGAAGATGGGCGCACCCTCTCTGATTATAA 100318 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 ||| ||||| ||||| ||| | ||| | || | |||||| | || || Sbjct 100317 TATCCAAAAGGAATCAACATTGCATCTTGTACTTCGTCTGAGAGGAGG 100270 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 |||||| |||||||| ||||| |||| |||||||| || || ||||| ||||| Sbjct 102549 AATGCAGATTTTTGTTAAAACTCTGACTGGCAAAACAATCACACTGGAAGTTGAACCTTC 102490 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 ||| || ||| | || || ||| || || || ||||| | || ||||| Sbjct 102489 AGATACTATTGAAAATGTGAAGGCAAAGATCCAAGATAAGGAAGGTATCCCTCCTGATCA 102430 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 ||| || | |||| ||| || || || | |||||| ||| | | |||||||| Sbjct 102429 ACAGAGATTGATTTTTGCTGGAAAGCAGCTTGAAGATGGACGTACTCTTTCTGATTATAA 102370 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || |||||||||||||| || |||||||| ||||| | || ||||| Sbjct 102369 CATTCAAAAAGAATCTACTCTTCATTTAGTCCTGCGTTTACGTGGTGG 102322 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||||||||| ||||| | |||||||| || || || ||||| ||||| Sbjct 100724 ATGCAAATTTTTGTTAAAACTCTTACCGGCAAGACAATCACGCTGGAAGTTGAACCTTCA 100665 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | ||| | || || |||||| || |||||||| |||| |||||| Sbjct 100664 GATACCATTGAAAATGTGAAGGCTAAAATTCAGGATAAAGAAGGAATTCCACCAGATCAA 100605 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | | |||| ||| || |||||| | |||||| ||| | | ||||| || Sbjct 100604 CAACGTTTGATTTTTGCTGGAAAACAACTCGAAGATGGCCGAACCCTTTCTGATTACAAC 100545 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || || |||||||| || ||||| || ||||| || | ||||| Sbjct 100544 ATTCAGAAGGAATCTACTCTTCATTTGGTCCTGCGTTTGAGAGGTGG 100498 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 ||||||||| ||||| ||||| | |||||||| || || || ||||| ||||| Sbjct 102321 AATGCAAATATTTGTTAAAACTCTTACCGGCAAGACAATCACGCTGGAAGTTGAACCATC 102262 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 || || ||| | || ||| |||||| || |||||||| | ||| || || Sbjct 102261 TGACACTATTGAAAATGTCAAAGCGAAAATTCAAGATAAAGAAGGAATACCCCCTGACCA 102202 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 || | | |||| ||| || |||||| | |||||| ||| | | |||||||| Sbjct 102201 GCAGCGTTTAATTTTTGCTGGAAAACAACTTGAAGATGGGCGAACCCTTTCAGATTATAA 102142 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 ||| |||||||| || || || ||| | || |||| ||||| ||||| Sbjct 102141 TATTCAAAAAGAGTCCACTCTTCATCTTGTACTGCGGCTGCGAGGTGG 102094 Score = 89.7 bits (98), Expect = 4e-13 Identities = 165/240 (69%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 111178 AGTTTAAAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACG 111237 || || || ||||| || || ||||| || | ||||||||||| ||||| | ||| Sbjct 103469 AGATTGAAGATGCAGATCTTCGTCAAGACACTTACCGGCAAAACAATTACATTAGAAGTT 103410 Query 111238 GAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCC 111297 || || || | | | | || || |||||| ||||||||||| ||||| Sbjct 103409 GAGCCTTCTGACACAATAGAAAATGTTAAGGCCAAAATTCAAGACAAAGAAGGAATTCCC 103350 Query 111298 GTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATT--CTAAAACTATGG 111355 || ||||| || | |||| ||| || || || | |||||| | | ||| | Sbjct 103349 CCAGACCAACAGAGATTAATTTTTGCTGGAAAGCAGCTTGAAGATGGCCGCACACTTT-- 103292 Query 111356 CCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415 | ||||||||||| || |||||||||||| ||||||| ||| | |||||| | || |||| Sbjct 103291 CAGATTATAATATTCAGAAAGAATCTACATTACATTTGGTGCTTCGTCTGAGAGGAGGCA 103232 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || ||||| ||||| | || |||||||| || ||| ||||| ||||| Sbjct 101636 ATGCAGATCTTTGTGAAAACTTTAACTGGCAAAACTATAACCTTGGAAGTTGAACCATCT 101577 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | | | | || ||| |||||| || |||||||| |||| ||||| Sbjct 101576 GATACCATAGAAAATGTTAAAGCTAAAATTCAGGATAAAGAAGGTATTCCACCTGATCAG 101517 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || || || |||| || || |||||| | |||||| || | | ||||||||| Sbjct 101516 CAGAGACTGATTTTCGCTGGTAAACAACTAGAAGATGGCCGCACCCTCTCTGATTATAAT 101457 Query 111367 ATACAAAAAGAATCTACACTACATTTAGT 111395 || || |||||||| || |||||||||| Sbjct 101456 ATCCAGAAAGAATCAACCTTACATTTAGT 101428 >seq1631 Length=286364 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 |||||| || || || || || | || || |||||||||||| | || |||||| Sbjct 118981 AATGCAGATCTTCGTTAAGACCCTCACGGGTAAAACCATTACCCTAGAGGTAGAACCCTC 119040 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 ||| || | | | || ||| |||||| ||||||||||| | || ||||| Sbjct 119041 TGATACTATCGAAAATGTGAAAGCTAAAATTCAAGACAAAGAAGGAATACCTCCAGATCA 119100 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 ||| |||||||||| ||| || ||||||||||||||| | |||| | | ||||| || Sbjct 119101 ACAGAGGCTTATTTTTGCTGGTAAACAATTGGAAGATGGAAGAACTCTCTCTGATTACAA 119160 Query 111366 TATACAAAAAG 111376 ||||||||||| Sbjct 119161 TATACAAAAAG 119171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422977264225600