Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq53 105 1e-17 >seq53 Length=1573976 Score = 105 bits (116), Expect = 1e-17 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 42612 TTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGG 42671 ||||| ||||| || || ||| || | ||||||||||| || ||||| || ||| Sbjct 796105 TTCAATGCCATCGAAACCATGGAGTGTGTTAAGAAGAAGGCTGATTGGGCACTTTCTTGG 796164 Query 42672 ATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGC 42731 ||| |||||| || || || || ||||| | ||||| ||| | || || || || Sbjct 796165 ATCTCCAGTCCCACGGCCACTTTTGGTGAGAGAATAGTAGCGTTTGCTGCTGTTGAAGGA 796224 Query 42732 ATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCC 42790 || ||||| || ||| |||| || | || || ||||| ||| ||| |||| || ||||| Sbjct 796225 ATTTTCTTTTCTGGCTCCTTTGCTGCTATTTTTTGGCTTAAGAAGAGAGGTCTC-ATGCC 796283 Query 42791 CGGACTCACCTTCTCGAACGAACTCAT 42817 ||||| ||||| || || || ||||| Sbjct 796284 AGGACTTACCTTTTCAAATGAGCTCAT 796310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944195566007680