Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq8630 104 2e-17 seq1287 91.5 1e-13 >seq8630 Length=1029 Score = 104 bits (114), Expect = 2e-17 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||| Sbjct 732 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 791 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422 | |||||||||| |||||| || | ||| || Sbjct 792 ATAACTGATATAATGAGCCTTTTGCGGTTTC 822 Score = 104 bits (114), Expect = 2e-17 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||| Sbjct 732 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 791 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619 | |||||||||| |||||| || | ||| || Sbjct 792 ATAACTGATATAATGAGCCTTTTGCGGTTTC 822 >seq1287 Length=463317 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || || || |||| || | ||| || || |||||||| ||||||||||| | | Sbjct 100042 CCGCCCCTAAGACGCAAAACTAAATGCAGGGTTGATTCCTTCTGGATGTTGTAATCAGAC 100101 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 || ||| | || || | ||| || || ||||| || || | |||||||||| || Sbjct 100102 AAGGTTCGGCCATCTTCAAGTTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCCGGTGGA 100161 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCGCA 34079 | | ||||| ||| | | |||| |||| | || | | | |||| || ||| Sbjct 100162 ATTCCTTCTTTATCC-TGAATTTTAGCTTTAACATTTTCAATAGTGTCAGAAGGTTCTAC 100220 Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 ||| | || |||||||||||||||| ||||| ||||| ||||||||| Sbjct 100221 TTCTAGTGTGATTGTTTTTCCGGTTAAAGTTTTAACAAAAATTTGCATT 100269 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/230 (68%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || ||||||| ||||| |||| |||||| || |||||||||||||||||||| | Sbjct 100498 CCACCTCTCAAACGCAGGACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGAA 100557 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | ||| | || || | ||| || || ||||| |||| || || ||||| || Sbjct 100558 AGGGTTCGGCCATCTTCGAGTTGTTTTCCAGCAAAAATCAAACGTTGTTGATCTGGTGGA 100617 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACA---CTATCAGTAGATTCG 34077 | | ||||| ||| |||||| ||| | | | || |||| | || ||| Sbjct 100618 ATTCCTTCTTTATCCTGAATTTTAGCCTTCA---CATTTTCAATGGTATCTGAAGGTTCA 100674 Query 34078 CATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 ||| | ||| ||||| || ||||| || ||||| ||||| |||||||| Sbjct 100675 ACTTCCAGCGTGATTGTCTTGCCGGTAAGAGTTTTAACAAAAATTTGCAT 100724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397003516638736