Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq472 104 2e-17 >seq472 Length=1490752 Score = 104 bits (114), Expect = 2e-17 Identities = 99/124 (80%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 108466 TGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACAC-GACGGCCGACCCACACAA 108524 |||||| || ||||||||||||||||||| |||||| || ||| || ||||| ||||| Sbjct 278035 TGGGTGAGGGACCACAGGGTTCACCACAAGTTCTCTGAGACAGAC-GCGGACCCGCACAA 277977 Query 108525 CGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGA 108584 || ||| || || |||| ||| | |||||||| ||||| ||||||| ||| | ||||| Sbjct 277976 CGTCAAAAGAGGATTCTTCTTCGCCCACGTGGGCTGGCTGATGATGAGGAAGCATCCCGA 277917 Query 108585 CGTG 108588 ||| Sbjct 277916 AGTG 277913 Score = 84.2 bits (92), Expect = 2e-11 Identities = 75/93 (81%), Gaps = 1/93 (1%) Strand=Plus/Minus Query 108858 AGAAAACAAATTGGTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGT 108917 |||||||| | |||| | | ||||||||||||||| |||||||||||||| ||||| Sbjct 274686 AGAAAACATCTGGGTGTCTCTATGGGCTCTCGGCGAGGGTTGGCACAACTACCATCACGT 274627 Query 108918 GTTCCCCTACGACTACAAGGCCGCCGAG-TTGG 108949 ||||| | ||||||||||| || ||| |||| Sbjct 274626 CTTCCCATGGGACTACAAGGCGGCAGAGATTGG 274594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381716184048192