Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1287 102 8e-17 >seq1287 Length=463317 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| | | ||||||||||||||| | | |||| ||||| || |||||||| || | Sbjct 100042 CCGCCCCTAAGACGCAAAACTAAATGCAGGGTTGATTCCTTCTGGATGTTGTAATCAGAC 100101 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || |||||||| || | | | || || | ||| || ||||| || Sbjct 100102 AAGGTTCGGCCATCTTCAAGTTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCCGGTGGA 100161 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 || |||||||| || ||| |||| | ||||| | ||| | ||||| | | || || Sbjct 100162 ATTCCTTCTTTATC-CTGAATTTTAGCTTTAACATTTTCAATAGTGTCAGAAGGTTCTAC 100220 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| || || | |||||| |||||||| ||||| Sbjct 100221 TTCTAGTGTGATTGTTTTTCCGGTTAAAGTTTTAACAAAAATTTGCAT 100268 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||||| |||| || | ||| | | ||||| ||||| || || || || | Sbjct 101182 CCACCTCGCAGCCGCAGTACAAGATGAAGAGTGGACTCTTTTTGTATATTATAATCTGAC 101241 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || ||||||||||| || | |||| | |||||| ||||| ||||| Sbjct 101242 AGGGTTCGGCCATCTTCGAGTTGTTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGA 101301 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 || |||||||| || ||| |||| | |||| | ||| | |||||| | | ||| || Sbjct 101302 ATTCCTTCTTTATC-TTGAATTTTAGCCTTAACATTTTCGATGGTGTCTGAAGGCTCAAC 101360 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | |||||||||||| ||||| || || || |||||||| Sbjct 101361 TTCTAATGTAATCGTTTTACCAGTTAGAGTCTTGACGAAGATCTGCAT 101408 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| | ||| | |||||||||| | || || || ||||||||||| || Sbjct 102550 CCTCCTCTAAGACGAAGTACTAAATGTAAAGTAGATTCTTTCTGAATGTTGTAATCTGAA 102609 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || || || || || | | | |||| | ||||||||| ||||| Sbjct 102610 AGAGTACGGCCATCTTCAAGCTGCTTTCCAGCAAATATTAATCTCTGTTGGTCTGGAGGG 102669 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||||||||| ||| |||| | || | | ||| | ||||| | | ||| || Sbjct 102670 ATTCCTTCTTTGTC-TTGAATTTTAGCCTTGACATTTTCGATTGTGTCAGAAGGCTCAAC 102728 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||||||||| | |||||| |||||||| ||||| Sbjct 102729 TTCCAATGTAATTGTTTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 102776 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| |||||||| || ||||| | | || ||||| ||||||||||| || Sbjct 100498 CCACCTCTCAAACGCAGGACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGAA 100557 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || ||||||||||| || | | | || | ||| ||||| || || || Sbjct 100558 AGGGTTCGGCCATCTTCGAGTTGTTTTCCAGCAAAAATCAAACGTTGTTGATCTGGTGGA 100617 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || |||||||| || ||| |||| | || | | ||| | ||| || | | || || Sbjct 100618 ATTCCTTCTTTATC-CTGAATTTTAGCCTTCACATTTTCAATGGTATCTGAAGGTTCAAC 100676 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | ||| | || || || || |||||||| |||||||| ||||| Sbjct 100677 TTCCAGCGTGATTGTCTTGCCGGTAAGAGTTTTAACAAAAATTTGCAT 100724 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || ||||| | ||||||||||| | |||| ||||| |||||||| || || | Sbjct 101866 CCACCACGTAAACGTAGAACTAAATGTAAGGTTGATTCCTTCTGAATGTTATAATCAGAC 101925 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || | ||||| || | | |||| | ||| || || || || || Sbjct 101926 AGAGTACGACCATCTTCCAACTGTTTTCCTGCAAAGATCAAACGTTGCTGATCTGGTGGA 101985 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| || || || ||| |||| | ||||| | ||| | || || | | ||||| Sbjct 101986 ATACCCTCCTTATC-TTGAATTTTAGCTTTAACATTTTCAATTGTATCAGAAGGTTCCAC 102044 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||| || || || | ||| || ||||| || ||||| Sbjct 102045 TTCCAATGTAATCGTCTTTCCTGTTAAAGTCTTCACAAATATTTGCAT 102092 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || ||||||| |||||||| | | || || ||||||||||| || || Sbjct 102322 CCACCACGTAAACGCAGGACTAAATGAAGAGTAGATTCTTTTTGAATGTTATAATCAGAA 102381 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || || || || || | | | || | | |||||| || ||||| Sbjct 102382 AGAGTACGTCCATCTTCAAGCTGCTTTCCAGCAAAAATCAATCTCTGTTGATCAGGAGGG 102441 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| || || ||| ||| || | | ||| | || || | | || || Sbjct 102442 ATACCTTCCTTATCTTGGATCTTTGCCTTCACATTTTCAATAGTATCTGAAGGTTCAACT 102501 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| |||||||||||||| |||||||||||||| Sbjct 102502 TCCAGTGTGATTGTTTTGCCAGTCAGAGTTTTAACAAAAATCTGCAT 102548 Score = 89.7 bits (98), Expect = 5e-13 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| |||| ||||| | |||||||||| | |||| || || ||||| || || || Sbjct 103005 GCCTCCTCTTAAACGAAGTACTAAATGTAAGGTTGATTCTTTCTGAATATTATAATCTGA 103064 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || || || || || || || | | | |||| | ||||||||| || || Sbjct 103065 AAGGGTGCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGGGG 103124 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||||||||| |||||| || | | ||| | ||||| | | || || Sbjct 103125 AATTCCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCGATTGTGTCAGAAGGTTCAAC 103184 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 || | || | ||||| ||||| |||||||| ||||| ||||||||| || Sbjct 103185 TTCTAAAGTGATTGTTTTGCCAGTAAGAGTTTTAACAAAGATCTGCATGCCT 103236 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||||| | |||||||||| | |||| || || || || || || || Sbjct 101410 CCTCCTCTTAAACGAAGTACTAAATGTAAGGTTGATTCTTTCTGGATATTATAATCAGAG 101469 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || ||||||||||| | | || || | ||| || || || || Sbjct 101470 AGGGTGCGGCCATCTTCTAGTTGTTTACCAGCGAAAATCAGTCTCTGCTGATCAGGTGGA 101529 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||||||||| || ||| |||| | ||||| | ||| | ||| || | | || || Sbjct 101530 ATACCTTCTTTATC-CTGAATTTTAGCTTTAACATTTTCTATGGTATCAGATGGTTCAAC 101588 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| ||||| | |||||| ||||| |||||||| Sbjct 101589 TTCCAAGGTTATAGTTTTGCCAGTTAAAGTTTTCACAAAGATCTGCAT 101636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496186918488960