Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1287 127 2e-24 seq421 91.5 1e-13 >seq1287 Length=463317 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| ||||| |||| || ||||| | ||||| ||||||||||| || ||||| Sbjct 102321 TCCACCACGTAAACGCAGGACTAAATGAAGAGTAGATTCTTTTTGAATGTTATAATCAGA 102380 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || || ||| || ||||| |||||||| | ||||||| ||| ||||| ||||| Sbjct 102381 AAGAGTACGTCCATCTTCAAGCTGCTTTCCAGCAAAAATCAATCTCTGTTGATCAGGAGG 102440 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||| || ||| || ||| | | ||| | || || | | || || Sbjct 102441 GATACCTTCCTTATCTTGGATCTTTGCCTTCACATTTTCAATAGTATCTGAAGGTTCAAC 102500 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | |||||||| ||||||||||| |||||||||||||| Sbjct 102501 TTCCAGTGTGATTGTTTTGCCAGTCAGAGTTTTAACAAAAATCTGCAT 102548 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| || | ||| | || ||||||||||| ||||| ||||| | Sbjct 101182 CCACCTCGCAGCCGCAGTACAAGATGAAGAGTGGACTCTTTTTGTATATTATAATCTGAC 101241 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || || |||||||||||| ||||||| |||||||| || ||||| Sbjct 101242 AGGGTTCGGCCATCTTCGAGTTGTTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGA 101301 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || || || || ||||| ||| | | ||||| |||||| | | ||| ||| Sbjct 101302 ATTCCTTCTTTATCTTGAATTTTAGCCTTAACATTTTCGATGGTGTCTGAAGGCTCAACT 101361 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | |||||| || || ||||| || || || |||||||| Sbjct 101362 TCTAATGTAATCGTTTTACCAGTTAGAGTCTTGACGAAGATCTGCAT 101408 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| | || |||| |||||||| | ||||| || || ||||| |||||||| Sbjct 100497 TCCACCTCTCAAACGCAGGACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGA 100556 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || || ||| || || ||||||||||| | ||||| || || ||||| || || Sbjct 100557 AAGGGTTCGGCCATCTTCGAGTTGTTTTCCAGCAAAAATCAAACGTTGTTGATCTGGTGG 100616 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || || || ||| ||||| ||| | | ||| | ||| || | | || || Sbjct 100617 AATTCCTTCTTTATCCTGAATTTTAGCCTTCACATTTTCAATGGTATCTGAAGGTTCAAC 100676 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | || |||||||| |||||||| |||||||| ||||| Sbjct 100677 TTCCAGCGTGATTGTCTTGCCGGTAAGAGTTTTAACAAAAATTTGCAT 100724 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||||||||| ||||| ||||| |||||||| ||||| | ||||| ||| || Sbjct 103251 CACCAAATGTAATGTAGATTCTTTCTGAATATTATAATCTGAAAGTGTGCGGCCATCTTC 103310 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| |||||||| | || |||| ||| || || || || || || || ||||| Sbjct 103311 AAGCTGCTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGGGGAATTCCTTCTTTGTCTTG 103370 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 ||||| ||| | | ||| | ||||| | | ||| ||||| | || | ||||| Sbjct 103371 AATTTTGGCCTTAACATTTTCTATTGTGTCAGAAGGCTCAACTTCTAATGTAATTGTTTT 103430 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||||| || || || || || |||||||| Sbjct 103431 GCCGGTAAGTGTCTTGACGAAGATCTGCAT 103460 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| || | ||| | || ||||||||||||||||| ||||| Sbjct 102094 CCACCTCGCAGCCGCAGTACAAGATGAAGAGTGGACTCTTTTTGAATATTATAATCTGAA 102153 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || || ||||||||||| | || || |||||||| || || ||| Sbjct 102154 AGGGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAAATTAAACGCTGCTGGTCAGGGGGT 102213 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || || || || |||||| |||| | ||| | ||||| | || ||| Sbjct 102214 ATTCCTTCTTTATCTTGAATTTTCGCTTTGACATTTTCAATAGTGTCAGATGGTTCAACT 102273 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || |||||||| |||||||| ||||| || ||||| Sbjct 102274 TCCAGCGTGATTGTCTTGCCGGTAAGAGTTTTAACAAATATTTGCAT 102320 Score = 89.7 bits (98), Expect = 5e-13 Identities = 146/207 (71%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 126910 ATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTG 126969 ||||| || || || ||||||||||||||||| | || || ||| || ||||| Sbjct 100749 ATGTAAGGTGGATTCCTTTTGAATATTGTAATCTGAAAGGGTTCGGCCATCTTCAAGCTG 100808 Query 126970 TTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTT 127029 |||||||| | ||||||| ||| ||||| || || || || || || ||| ||| ||| Sbjct 100809 CTTTCCAGCAAAAATCAATCTCTGTTGATCCGGTGGAATTCCTTCTTTATCC-TGAATTT 100867 Query 127030 CTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCG 127087 |||| | ||| || | || || | ||| ||||| | || | || || || Sbjct 100868 TGGCTTTAACGTT-CTCAATAGTATCAGATGGCTCAACTTCCAAAGTGATAGTCTTTCCA 100926 Query 127088 GTCAGAGTTTTTACAAAAATCTGCATG 127114 || |||||||| |||||||| |||||| Sbjct 100927 GTGAGAGTTTTAACAAAAATTTGCATG 100953 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| | | || || |||| ||| | ||||| || || || ||||||||||| Sbjct 102777 TCCACCTCTCAGACGTAAGACCAGATGAAGAGTAGATTCCTTCTGGATATTGTAATCTGA 102836 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || || || ||| ||||| ||||| ||||| | |||| || || || || || || Sbjct 102837 CAAGGTACGGCCATCTTCTAGTTGTTTGCCAGCAAAAATCAGTCTTTGTTGGTCTGGTGG 102896 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || || || || ||||| ||| | | ||| | ||||| | | ||| || Sbjct 102897 AATTCCTTCTTTATCTTGAATTTTGGCCTTAACATTTTCAATTGTGTCTGAAGGCTCAAC 102956 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 ||| | || | ||||| ||||| ||||| || || || ||||||||| || Sbjct 102957 TTCTAATGTAATTGTTTTACCGGTTAGAGTCTTGACGAAGATCTGCATGCCT 103008 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || |||||||||||||||||||| | ||||| ||| || | ||||||||| Sbjct 101668 GTGGATTCTTTTTGAATATTGTAATCAGAAAGGGTGCGTCCATCTTCCAACTGTTTTCCT 101727 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TT 127035 || |||||| | |||||||| || || || || || || ||| ||| ||| || || Sbjct 101728 GCAAAGATCAGCCTTTGCTGATCTGGCGGAATTCCTTCTTTATCC-TGAATTTTAGCTTT 101786 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | ||| | ||||| | | || ||||| | || | ||||| || || || || Sbjct 101787 AACATTTTCAATAGTGTCAGAAGGTTCCACTTCTAATGTAATGGTTTTTCCTGTTAGTGT 101846 Query 127096 TTTTACAAAAATCTGCAT 127113 || |||||||| ||||| Sbjct 101847 CTTGACAAAAATTTGCAT 101864 >seq421 Length=1623507 Score = 91.5 bits (100), Expect = 1e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 126902 AACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCG 126961 ||||| ||||||| ||||| || || |||||||||||||| | ||||| ||| Sbjct 990197 AACACTAAATGTAAGGTAGATTCCTTCTGAATATTGTAATCAGAAAGTGTGCGGCCATCT 990256 Query 126962 TCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCC 127011 |||| ||||||||||||| | ||||| ||||| ||||| ||||| || || Sbjct 990257 TCTAACTGTTTTCCAGCGAAAATCAAACGCTGTTGATCAGGAGGAATACC 990306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475428476328320