Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1287 107 2e-18 >seq1287 Length=463317 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || ||||| || || ||||| || ||||| | || || || | | Sbjct 100724 ATGCAAATTTTTGTTAAAACTCTTACCGGCAAGACAATCACGCTGGAAGTTGAACCTTCA 100665 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | ||| | || | ||||| | || ||||| |||||||| | || ||| Sbjct 100664 GATACCATTGAAAATGTGAAGGCTAAAATTCAGGATAAAGAAGGAATTCCACCAGATCAA 100605 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || | |||| || || ||||| || || || | || ||||| || |||||| Sbjct 100604 CAACGTTTGATTTTTGCTGGAAAACAACTCGAAGATGGCCGAACCCTTTCTGATTACAAC 100545 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || || |||||| | || || |||||||| |||||||||||||| || Sbjct 100544 ATTCAGAAGGAATCTACTCTTCATTTGGTCCTGCGTTTGAGAGGTGG 100498 Score = 105 bits (116), Expect = 7e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || || || |||||||| || || | || || ||| | Sbjct 103463 AAGATGCAGATCTTCGTCAAGACACTTACCGGCAAAACAATTACATTAGAAGTTGAGCCT 103404 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | ||| |||| | ||||| | |||||||| ||||||||| | ||| Sbjct 103403 TCTGACACAATAGAAAATGTTAAGGCCAAAATTCAAGACAAAGAAGGAATTCCCCCAGAC 103344 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 |||||| | | |||| || || || ||||| || || | ||||| || || || Sbjct 103343 CAACAGAGATTAATTTTTGCTGGAAAGCAGCTTGAAGATGGCCGCACACTTTCAGATTAT 103284 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 || || || || ||| | || | ||||||||||| ||| ||||||| ||| Sbjct 103283 AATATTCAGAAAGAATCTACATTACATTTGGTGCTTCGTCTGAGAGGAGGC 103233 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| || || ||||| | || || ||||| ||||| | || || || | | Sbjct 100269 AATGCAAATTTTTGTTAAAACTTTAACCGGAAAAACAATCACACTAGAAGTAGAACCTTC 100210 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | ||| |||||| ||||| | || ||||| |||||||| | || || Sbjct 100209 TGACACTATTGAAAATGTTAAAGCTAAAATTCAGGATAAAGAAGGAATTCCACCGGATCA 100150 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | || |||| || || ||||| || || || | || ||| | || ||||| Sbjct 100149 GCAGAGACTTATTTTTGCTGGGAAACAACTTGAAGATGGCCGAACCTTGTCTGATTACAA 100090 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| |||||| | || |||||||| || ||||| | || ||||| Sbjct 100089 CATCCAGAAGGAATCAACCCTGCATTTAGTTTTGCGTCTTAGGGGCGG 100042 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| || || ||||| | || || ||||| || || | || || || | | Sbjct 100497 AATGCAAATTTTTGTTAAAACTTTAACTGGGAAAACAATTACATTGGAAGTTGAACCATC 100438 Query 38303 CGACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | ||||| |||||| ||||| | || || || |||||||| | || | Sbjct 100437 AGATACTATTGAAAACG-TTAAAGCTAAAATTCAGGATAAGGAAGGAATTCCTCCAGATC 100379 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||| | | |||| || |||||||| | || || | |||||||||| || || | Sbjct 100378 AGCAGAGATTGATTTTTGCTGGCAAACAATTAGAAGATGGGCGCACCCTCTCTGATTATA 100319 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 | |||||||||||| | || ||||| | || || ||| ||||||| || Sbjct 100318 ATATCCAAAAGGAATCAACATTGCATCTTGTACTTCGTCTGAGAGGAGG 100270 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||||||||| || ||||| || || ||||| || ||||| | || || || | | Sbjct 102321 AATGCAAATATTTGTTAAAACTCTTACCGGCAAGACAATCACGCTGGAAGTTGAACCATC 102262 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | ||| | |||| ||||| | || ||||| ||||| ||| | ||||| Sbjct 102261 TGACACTATTGAAAATGTCAAAGCGAAAATTCAAGATAAAGAAGGAATACCCCCTGACCA 102202 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | |||| || || ||||| || || || | ||| ||||| || || || Sbjct 102201 GCAGCGTTTAATTTTTGCTGGAAAACAACTTGAAGATGGGCGAACCCTTTCAGATTATAA 102142 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || ||||| || | || || ||| | || ||||| || |||| || Sbjct 102141 TATTCAAAAAGAGTCCACTCTTCATCTTGTACTGCGGCTGCGAGGTGG 102094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500096723717120