Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1287 102 5e-17 >seq1287 Length=463317 Score = 102 bits (112), Expect = 5e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| |||| | | ||||| || | ||| |||||||||||| ||||| || ||| Sbjct 103234 CCTCCTCTCAGACGAAGCACCAAATGTAATGTAGATTCTTTCTGAATATTATAATCTGAA 103293 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| || ||||| ||||| ||||| |||| || || |||||| | || Sbjct 103294 AGTGTGCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGGGGA 103353 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || || ||||| ||| || || || | |||| | ||| | |||||| Sbjct 103354 ATTCCTTCTTTGTCTTGAATTTTGGCCTTAACATTTTCTATTGTGTCAGAAGGCTCAACT 103413 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATTC 34985 || | || || ||||| || || || ||||| || ||||||||||| ||| Sbjct 103414 TCTAATGTAATTGTTTTGCCGGTAAGTGTCTTGACGAAGATCTGCATCTTC 103464 Score = 96.9 bits (106), Expect = 2e-15 Identities = 147/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 34775 CAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCA 34833 |||| || | |||| |||||| ||||| || || || |||||| | ||| |||| |||| Sbjct 101657 CAAGATGCAGTGTGGATTCTTTTTGAATATTGTAATCAGAAAGGGTGCGTCCATCTTCCA 101716 Query 34834 GCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAA 34893 ||||||||| ||||| || || | |||||| ||| |||| | || || || || || Sbjct 101717 ACTGTTTTCCTGCAAAGATCAGCCTTTGCTGATCTGGCGGAATTCCTTCTTTATCCTGAA 101776 Query 34894 TCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953 | || ||| || | | || | ||| | || || || | || |||||||||| Sbjct 101777 TTTTAGCTTTAACATTTTCAATAGTGTCAGAAGGTTCCACTTCTAATGTAATGGTTTTTC 101836 Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || || ||||| ||||| || ||||| Sbjct 101837 CTGTTAGTGTCTTGACAAAAATTTGCAT 101864 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 |||||||||||| ||||| || |||||| | || |||| || ||||| ||||| ||||| Sbjct 103041 TTCTTTCTGAATATTATAATCTGAAAGGGTGCGGCCATCTTCAAGCTGCTTTCCAGCAAA 103100 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 |||| || || |||||| | || | || || ||||| || || ||||| Sbjct 103101 AATTAATCTCTGTTGGTCTGGGGGAATTCCTTCTTTGTCTTGGATTTTAGCCTTGACATT 103160 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | || | ||| | ||||| || | || || ||||| || || ||||| || || Sbjct 103161 TTCGATTGTGTCAGAAGGTTCAACTTCTAAAGTGATTGTTTTGCCAGTAAGAGTTTTAAC 103220 Query 34970 AAAGATCTGCAT 34981 |||||||||||| Sbjct 103221 AAAGATCTGCAT 103232 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| |||||||||||||| || || || | || |||| |||| ||||||||| ||||| Sbjct 101901 TTCCTTCTGAATGTTATAATCAGACAGAGTACGACCATCTTCCAACTGTTTTCCTGCAAA 101960 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || | |||||||| ||| | || | |||||||| || ||| || ||| || Sbjct 101961 GATCAAACGTTGCTGATCTGGTGGAATACCCTCCTTATCTTGAATTTTAGCTTTAACATT 102020 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | || | ||| | || || || | || || || ||||| || | ||||||||| Sbjct 102021 TTCAATTGTATCAGAAGGTTCCACTTCCAATGTAATCGTCTTTCCTGTTAAAGTCTTCAC 102080 Query 34970 AAAGATCTGCATA 34982 ||| || |||||| Sbjct 102081 AAATATTTGCATA 102093 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||||||||||| || || ||||| | || |||| || ||||| ||||| ||||| Sbjct 102585 TTCTTTCTGAATGTTGTAATCTGAAAGAGTACGGCCATCTTCAAGCTGCTTTCCAGCAAA 102644 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 ||||| || || |||||| | || | || || ||||| ||| || ||||| Sbjct 102645 TATTAATCTCTGTTGGTCTGGAGGGATTCCTTCTTTGTCTTGAATTTTAGCCTTGACATT 102704 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | || | ||| | |||||| || | || || ||||| || || | ||| || || Sbjct 102705 TTCGATTGTGTCAGAAGGCTCAACTTCCAATGTAATTGTTTTACCAGTTAAAGTTTTAAC 102764 Query 34970 AAAGATCTGCAT 34981 ||| || ||||| Sbjct 102765 AAAAATTTGCAT 102776 Score = 87.8 bits (96), Expect = 1e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||||| || ||||| || || ||| | || |||| || || ||||| || || || Sbjct 101445 TTCTTTCTGGATATTATAATCAGAGAGGGTGCGGCCATCTTCTAGTTGTTTACCAGCGAA 101504 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || |||| ||||| || | || | || || || || ||| || ||| || Sbjct 101505 AATCAGTCTCTGCTGATCAGGTGGAATACCTTCTTTATCCTGAATTTTAGCTTTAACATT 101564 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | |||| | ||| | ||||| || | |||||| ||||| || || | ||| ||||| Sbjct 101565 TTCTATGGTATCAGATGGTTCAACTTCCAAGGTTATAGTTTTGCCAGTTAAAGTTTTCAC 101624 Query 34970 AAAGATCTGCATA 34982 ||||||||||||| Sbjct 101625 AAAGATCTGCATA 101637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324585457648704