Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq2523 156 5e-33 seq53 123 3e-23 >seq2523 Length=169028 Score = 156 bits (172), Expect = 5e-33 Identities = 174/232 (75%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 48354 TTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACA 48413 ||||||||||||||||| | ||||| || ||||| ||| |||||||||||||||||||| Sbjct 113917 TTATTACCTCCTTGATCAACATATCGAGCTGTATTATTAAAAACTCTTAACATTGGGACA 113858 Query 48414 ATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTA 48473 | ||||||||| |||||||| || || | |||| | | || ||||||| || | Sbjct 113857 AGACCATTTGAAATACCATTCGTGCCAGCAATAAATGTCCCTTTAGCTCTGAT----GCA 113802 Query 48474 ATTGAAAT----ACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGT 48529 || || || ||| || || || || |||| ||||||| || | |||| || || Sbjct 113801 ATGGACATGCACACCAATGCCTCCAGCAGTTTTGGATATTAATGCTGATTGTTTCAGAGT 113742 Query 48530 ATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTA 48581 || |||||| ||||| ||||| || ||| ||| || ||||||||||||| Sbjct 113741 ATTATAAATACCTTCAATACTGTCCTCTTGCATGGCTAGTAGAAAACAACTA 113690 Score = 113 bits (124), Expect = 5e-20 Identities = 150/211 (71%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 47328 TGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGAT 47387 |||||||| ||||| |||||||| | |||| |||||| ||| |||||||| | ||| Sbjct 123313 TGAAATTCACCAGAAAGTACTCTTCTTGTATAAATATTAGATGTGTATGGTTCAAATGAT 123254 Query 47388 TCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTA 47447 |||||||| || |||||||||||||| || || || ||||||| ||| | | || | Sbjct 123253 TCATTATTGCCTAAAATTTGAGCAGTAGAAGCAGTTGGCATGGGTGCGATAAGCAAAGAA 123194 Query 47448 TTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCTGAT 47507 || | || ||||| |||| || | ||||||||||||||| | | Sbjct 123193 TTCCGTAATCCATGTTTTGAAATTTTTTCTTTCAATGCAGCCCAATCCCAAAGATCAGTT 123134 Query 47508 GGAACAACATTCCAAAAATCATATTG-AAGA 47537 ||| || |||||| | |||||| || |||| Sbjct 123133 GGAGTAATATTCCACATATCATACTGCAAGA 123103 Score = 111 bits (122), Expect = 2e-19 Identities = 140/190 (74%), Gaps = 5/190 (3%) Strand=Plus/Minus Query 47874 TTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATT 47933 |||| ||| || ||||||| |||||| ||||| | |||| || | |||||||| || Sbjct 121535 TTAA-TGCAATTGATGCTAAATTACAAACAGCAATTTCATCTGAAGAAGTATATTCAATA 121477 Query 47934 ATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATT--ATTNNNNT 47991 ||||||| ||| ||||||| ||| || ||||| || | ||||| ||||| ||| Sbjct 121476 ATTTCAGTACAAAGATTACTACACTTAATAGTTCCTAGATTTTTCTGATTTGATTTCC-- 121419 Query 47992 TGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGA 48051 | || || | || || || | ||| ||||| |||||||| | ||||||||||||| Sbjct 121418 TATTGCAAGAATCTTTATACAACATGTAAGGTACACCAGTTTCAACTTGAGATTCAATGA 121359 Query 48052 TAGATTTCCA 48061 ||| |||||| Sbjct 121358 TAGCTTTCCA 121349 Score = 96.9 bits (106), Expect = 4e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 48599 AGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTT 48658 |||| | | | | |||||||| || || ||||| |||| || || || | ||| || Sbjct 113586 AGTTGCAGCACTGAATAATGTGGGTGAGGCATGTGTAAAATATCCTTCAGAGAGCAAATT 113527 Query 48659 ATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAA 48718 ||||||| |||||||| |||||||||| ||| || || | || || | ||| || Sbjct 113526 GTATGTTTTAATAACAGCATCTATATCCTCACCATGGATTCCAACAGCAACCCTCATCAA 113467 Query 48719 CATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAA 48778 ||| | ||||||||||||||||| |||| | | ||| | | |||||| |||||| Sbjct 113466 CATGTGTTGAGGTCTTTCAACAACTTTGCCACTAATTCGAAGTAAATATGACCTTTCCAG 113407 Query 48779 TGT 48781 ||| Sbjct 113406 TGT 113404 Score = 89.7 bits (98), Expect = 6e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 48918 CTAAATAttttttttGTTTCTTTATGAAGATTAGATATAGATATTCTAGCAGCTAATATA 48977 ||||| | ||| || ||||||||||||||||| || | || ||||| |||||| | || Sbjct 109417 CTAAAAACTTTCTTGGTTTCTTTATGAAGATTTGAAACAGCTATTCGAGCAGCAAGTAAG 109358 Query 48978 GCATAATCTGGATGAATTGTTGTACATGTACTAGATATTTCTGCTGCTAATATATCTAAT 49037 |||||||| ||||| |||| || |||| || | |||| || || | |||| || Sbjct 109357 GCATAATCAGGATGTTTTGTGGTCATTGTAGCAGCTGTTTCAGCAGCAAGATTATCCAAC 109298 Query 49038 TCTTTAGTAGTTACACCTGTATATATTCCTTGAATAACTTTCAT 49081 || ||||| || || | ||| | || |||||||||||| Sbjct 109297 TCAACCGTAGTCACGCCAGGATAAAGACCAGAAATAACTTTCAT 109254 Score = 89.7 bits (98), Expect = 6e-13 Identities = 106/141 (75%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 48212 CATAAATATATCTGGTATCCAAAGAGCTATA-AATAAATCCCTAGTTCTTAGTTCTTCAT 48270 |||||| | ||||||||||||||| || ||| || | ||| |||| | || |||||| | Sbjct 114186 CATAAACAAATCTGGTATCCAAAGGGC-ATAGAACAGATCTCTAGCACGTACTTCTTCTT 114128 Query 48271 TGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAAT 48330 | ||| ||||| |||| | ||||| || || | ||||| |||||||| || || | || Sbjct 114127 TACCAGTATTCTTTTTTAAATCAAGGAATTCAAAAATATCTGCATGCCAAGGCTCAAGAT 114068 Query 48331 ATATTGCCATTACACCTGGTC 48351 | | || | | ||||||||| Sbjct 114067 AAACCGCAAATGCACCTGGTC 114047 >seq53 Length=1573976 Score = 123 bits (136), Expect = 3e-23 Identities = 174/243 (72%), Gaps = 1/243 (0%) Strand=Plus/Minus Query 18966 AAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGG 19025 || || |||| ||| | |||| |||| | ||| | ||||| ||||| || | || || Sbjct 796340 AATATAACAA-GTAATACCTCATCTCGAGATATGAGCTCATTTGAAAAGGTAAGTCCTGG 796282 Query 19026 CATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACC 19085 ||| || ||||| || || | ||| || |||| |||||| || ||||||||||| || || Sbjct 796281 CATGAGACCTCTCTTCTTAAGCCAAAAAATAGCAGCAAAGGAGCCAGAAAAGAAAATTCC 796222 Query 19086 TTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCA 19145 ||| || || ||||| || |||| ||| || ||| || | || | | ||||| Sbjct 796221 TTCAACAGCAGCAAACGCTACTATTCTCTCACCAAAAGTGGCCGTGGGACTGGAGATCCA 796162 Query 19146 TTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAG 19205 |||||||||||||||||||| || ||||| ||| || || || | ||| |||| Sbjct 796161 AGAAAGTGCCCAATCAGCCTTCTTCTTAACACACTCCATGGTTTCGATGGCATTGAATAA 796102 Query 19206 ATA 19208 ||| Sbjct 796101 ATA 796099 Score = 105 bits (116), Expect = 8e-18 Identities = 118/155 (76%), Gaps = 2/155 (1%) Strand=Plus/Minus Query 19450 TTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTC 19509 ||||| | ||| ||||| ||| | |||||||| || || || |||||||| ||||| ||| Sbjct 793942 TTAGAGAGATCAACTTCCTCAGCAGTCCAAAAGGATGCTTCAGCTTTTTTGTACATCTTC 793883 Query 19510 CATATATCACGATATTGTATAGGAAATATAACAAATCTatttttattttctttaagaata 19569 ||||||||| |||||| || || || |||||||| || || || |||||||| | Sbjct 793882 CATATATCATGATATTCAATTGGGAAAATAACAAACCTCCTTGGGTTATCTTTAAGGAGG 793823 Query 19570 ggttccattttttgaaaaataataatttcttttcA 19604 |||||| || | || | |||| | || ||||||| Sbjct 793822 GGTTCC-TTCTGTGTATCATAA-ACTTCCTTTTCA 793790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562023303251520