Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq53 122 1e-22 seq2268 113 5e-20 seq1196 104 3e-17 >seq53 Length=1573976 Score = 122 bits (134), Expect = 1e-22 Identities = 170/237 (72%), Gaps = 1/237 (0%) Strand=Plus/Minus Query 37181 AAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGG 37240 || || |||| |||| | ||||||| | ||| | ||||| |||||||| | |||||| Sbjct 796340 AATATAACAA-GTAATACCTCATCTCGAGATATGAGCTCATTTGAAAAGGTAAGTCCTGG 796282 Query 37241 CATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACC 37300 ||| | |||||| || |||| |||||| || || ||||| || |||||||||||||| || Sbjct 796281 CATGAGACCTCTCTTCTTAAGCCAAAAAATAGCAGCAAAGGAGCCAGAAAAGAAAATTCC 796222 Query 37301 TTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCA 37360 |||||| || ||||| ||||| | | ||| ||||| | | | || ||||| Sbjct 796221 TTCAACAGCAGCAAACGCTACTATTCTCTCACCAAAAGTGGCCGTGGGACTGGAGATCCA 796162 Query 37361 tttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAA 37417 || |||||| ||||| |||||||| || || ||||| || || || || Sbjct 796161 AGAAAGTGCCCAATCAGCCTTCTTCTTAACACACTCCATGGTTTCGATGGCATTGAA 796105 Score = 93.3 bits (102), Expect = 5e-14 Identities = 99/130 (76%), Gaps = 3/130 (2%) Strand=Plus/Minus Query 37404 TCAATTGCTTTTAAGA---GAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATT 37460 || ||| ||||||| | |||| | |||||| |||| | |||||||||||||| Sbjct 794382 TCCATTACTTTTAAAATAAGAAATTACCTTTCTTTTGGATCTCTAATATAAGTATCAATG 794323 Query 37461 AGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACAC 37520 || | || ||||| ||||| || | ||||| ||||| || |||||||| || |||||| Sbjct 794322 AGCAGGCTGTACATCTCAGAATGCACGTTTTCCATAGCAATTTGAAAACCGTAGAAACAC 794263 Query 37521 CTAGCTTCAG 37530 |||||||||| Sbjct 794262 CTAGCTTCAG 794253 >seq2268 Length=94292 Score = 113 bits (124), Expect = 5e-20 Identities = 86/102 (84%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 153288 GGTGTTTTACATACAAAATTTTGGATAGTTGATAATAAACATGTATATATAGGAAGTGCT 153347 ||| |||||||||| ||||| |||||||| |||| ||| ||| ||| | ||||||||| Sbjct 85617 GGTATTTTACATACCAAATTATGGATAGTCGATAGGAAAGTTGTTTATGTCGGAAGTGCT 85676 Query 153348 AATATGGATTGGAGATCACTAACTCAAGTAAAAGAATTAGGT 153389 |||||||||||||| ||||| | || ||||||||||||||| Sbjct 85677 AATATGGATTGGAGGTCACTTTCACATGTAAAAGAATTAGGT 85718 >seq1196 Length=588058 Score = 104 bits (114), Expect = 3e-17 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 153288 GGTGTTTTACATACAAAATTTTGGATAGTTGATAATAAACATGTATATATAGGAAGTGCT 153347 ||| ||| |||||| ||||| |||||||| |||| ||| ||| ||| | ||||||||| Sbjct 574973 GGTATTTCACATACCAAATTATGGATAGTCGATAGGAAAGTTGTTTATGTCGGAAGTGCT 575032 Query 153348 AATATGGATTGGAGATCACTAACTCAAGTAAAAGAATTAGGT 153389 |||||||||||||| ||||| | || |||||||||||||| Sbjct 575033 AATATGGATTGGAGGTCACTTTCACATATAAAAGAATTAGGT 575074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592226708614720