Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03]
12,168 sequences; 1,150,108,890 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq1287 109 4e-19
seq1631 91.5 1e-13
>seq1287
Length=463317
Score = 109 bits (120), Expect = 4e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 48552 CGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCG 48611
|||| || ||||| || || ||||||||||| || |||||||| ||| | || |
Sbjct 102334 CGCAGGACTAAATGAAGAGTAGATTCTTTTTGAATGTTATAATCAGAAAGAGTACGTCCA 102393
Query 48612 TCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTG 48671
|| || | |||||| || ||||| |||| || ||||||||| | || | || |||||
Sbjct 102394 TCTTCAAGCTGCTTTCCAGCAAAAATCAATCTCTGTTGATCAGGAGGGATACCTTCCTTA 102453
Query 48672 TCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATC 48731
|| |||||| || ||| | | || ||||| | || || |||| || ||
Sbjct 102454 TCTTGGATCTTTGCCTTCACATTTTCAATAGTATCTGAAGGTTCAACTTCCAGTGTGATT 102513
Query 48732 GTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| || |||| |||||| ||||||||||||||
Sbjct 102514 GTTTTGCCAGTCAGAGTTTTAACAAAAATCTGCAT 102548
Score = 102 bits (112), Expect = 6e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
|| || || || || | || | ||||| ||| || ||||||||||||||||| ||
Sbjct 100726 CCTCCTCTAAGACGAAGTACAAGATGTAAGGTGGATTCCTTTTGAATATTGTAATCTGAA 100785
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
|| |||| | || || | |||||| || ||||| |||| || ||||||||||| |||
Sbjct 100786 AGGGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAATCTCTGTTGATCCGGTGGA 100845
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC-CCACAGACTCTGACGCCTCCAC 48718
| || || || || || | ||| | |||| | | | | || || || | ||| ||
Sbjct 100846 ATTCCTTCTTTATC-CTGAATTTTGGCTTTAACGTTCTCAATAGTATCAGATGGCTCAAC 100904
Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|||| || || || ||||| || | |||||| |||||||| |||||
Sbjct 100905 TTCCAAAGTGATAGTCTTTCCAGTGAGAGTTTTAACAAAAATTTGCAT 100952
Score = 95.1 bits (104), Expect = 9e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
|||||||| || ||||| || ||||| || || || || || || |||||||||||
Sbjct 100042 CCGCCCCTAAGACGCAAAACTAAATGCAGGGTTGATTCCTTCTGGATGTTGTAATCAGAC 100101
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
| |||| | || || | || || || ||||| || |||| ||| ||||||| |||
Sbjct 100102 AAGGTTCGGCCATCTTCAAGTTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCCGGTGGA 100161
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| || || || || ||| || ||| ||| | | || || || | || ||
Sbjct 100162 ATTCCTTCTTTATCCTGAATTTTAGCTTTAACATTTTCAATAGTGTCAGAAGGTTCTACT 100221
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| | || || |||||||| || |||||||| |||||||| |||||
Sbjct 100222 TCTAGTGTGATTGTTTTTCCGGTTAAAGTTTTAACAAAAATTTGCAT 100268
Score = 93.3 bits (102), Expect = 3e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622
||| || ||| ||||||||||||||||||||||| || | || | || ||||||||
Sbjct 101661 ATGCAGTGTGGATTCTTTTTGAATATTGTAATCAGAAAGGGTGCGTCCATCTTCCAACTG 101720
Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682
|| || ||||| ||||| | || ||||| | |||| || || || || ||| ||
Sbjct 101721 TTTTCCTGCAAAGATCAGCCTTTGCTGATCTGGCGGAATTCCTTCTTTATCCTGAATTTT 101780
Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742
||| ||| | | || || || | ||||| || | ||||| |||||||| ||
Sbjct 101781 AGCTTTAACATTTTCAATAGTGTCAGAAGGTTCCACTTCTAATGTAATGGTTTTTCCTGT 101840
Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766
| || || |||||||| |||||
Sbjct 101841 TAGTGTCTTGACAAAAATTTGCAT 101864
>seq1631
Length=286364
Score = 91.5 bits (100), Expect = 1e-13
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636
||||||| |||||||||||||| ||| ||| | || ||||| || ||||| ||||| |
Sbjct 119171 CTTTTTGTATATTGTAATCAGAGAGAGTTCTTCCATCTTCCAATTGTTTACCAGCAAAAA 119112
Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC 48696
| || | ||||||||| | || | || || ||||| ||| || ||| |||
Sbjct 119111 TAAGCCTCTGTTGATCTGGAGGTATTCCTTCTTTGTCTTGAATTTTAGCTTTCACATTTT 119052
Query 48697 CCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAA 48756
| | || || || | || ||||| | ||||| ||||| ||||| | || || || |
Sbjct 119051 CGATAGTATCAGAGGGTTCTACCTCTAGGGTAATGGTTTTACCCGTGAGGGTCTTAACGA 118992
Query 48757 AAATCTGCAT 48766
| ||||||||
Sbjct 118991 AGATCTGCAT 118982
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380881107906264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |