Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq1287 109 4e-19 seq1631 91.5 1e-13 >seq1287 Length=463317 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 48552 CGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCG 48611 |||| || ||||| || || ||||||||||| || |||||||| ||| | || | Sbjct 102334 CGCAGGACTAAATGAAGAGTAGATTCTTTTTGAATGTTATAATCAGAAAGAGTACGTCCA 102393 Query 48612 TCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTG 48671 || || | |||||| || ||||| |||| || ||||||||| | || | || ||||| Sbjct 102394 TCTTCAAGCTGCTTTCCAGCAAAAATCAATCTCTGTTGATCAGGAGGGATACCTTCCTTA 102453 Query 48672 TCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATC 48731 || |||||| || ||| | | || ||||| | || || |||| || || Sbjct 102454 TCTTGGATCTTTGCCTTCACATTTTCAATAGTATCTGAAGGTTCAACTTCCAGTGTGATT 102513 Query 48732 GTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || |||| |||||| |||||||||||||| Sbjct 102514 GTTTTGCCAGTCAGAGTTTTAACAAAAATCTGCAT 102548 Score = 102 bits (112), Expect = 6e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || || | || | ||||| ||| || ||||||||||||||||| || Sbjct 100726 CCTCCTCTAAGACGAAGTACAAGATGTAAGGTGGATTCCTTTTGAATATTGTAATCTGAA 100785 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || |||| | || || | |||||| || ||||| |||| || ||||||||||| ||| Sbjct 100786 AGGGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAATCTCTGTTGATCCGGTGGA 100845 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC-CCACAGACTCTGACGCCTCCAC 48718 | || || || || || | ||| | |||| | | | | || || || | ||| || Sbjct 100846 ATTCCTTCTTTATC-CTGAATTTTGGCTTTAACGTTCTCAATAGTATCAGATGGCTCAAC 100904 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || || ||||| || | |||||| |||||||| ||||| Sbjct 100905 TTCCAAAGTGATAGTCTTTCCAGTGAGAGTTTTAACAAAAATTTGCAT 100952 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 |||||||| || ||||| || ||||| || || || || || || ||||||||||| Sbjct 100042 CCGCCCCTAAGACGCAAAACTAAATGCAGGGTTGATTCCTTCTGGATGTTGTAATCAGAC 100101 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | |||| | || || | || || || ||||| || |||| ||| ||||||| ||| Sbjct 100102 AAGGTTCGGCCATCTTCAAGTTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCCGGTGGA 100161 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || || || || ||| || ||| ||| | | || || || | || || Sbjct 100162 ATTCCTTCTTTATCCTGAATTTTAGCTTTAACATTTTCAATAGTGTCAGAAGGTTCTACT 100221 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || |||||||| || |||||||| |||||||| ||||| Sbjct 100222 TCTAGTGTGATTGTTTTTCCGGTTAAAGTTTTAACAAAAATTTGCAT 100268 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| || ||| ||||||||||||||||||||||| || | || | || |||||||| Sbjct 101661 ATGCAGTGTGGATTCTTTTTGAATATTGTAATCAGAAAGGGTGCGTCCATCTTCCAACTG 101720 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 || || ||||| ||||| | || ||||| | |||| || || || || ||| || Sbjct 101721 TTTTCCTGCAAAGATCAGCCTTTGCTGATCTGGCGGAATTCCTTCTTTATCCTGAATTTT 101780 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 ||| ||| | | || || || | ||||| || | ||||| |||||||| || Sbjct 101781 AGCTTTAACATTTTCAATAGTGTCAGAAGGTTCCACTTCTAATGTAATGGTTTTTCCTGT 101840 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 | || || |||||||| ||||| Sbjct 101841 TAGTGTCTTGACAAAAATTTGCAT 101864 >seq1631 Length=286364 Score = 91.5 bits (100), Expect = 1e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636 ||||||| |||||||||||||| ||| ||| | || ||||| || ||||| ||||| | Sbjct 119171 CTTTTTGTATATTGTAATCAGAGAGAGTTCTTCCATCTTCCAATTGTTTACCAGCAAAAA 119112 Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC 48696 | || | ||||||||| | || | || || ||||| ||| || ||| ||| Sbjct 119111 TAAGCCTCTGTTGATCTGGAGGTATTCCTTCTTTGTCTTGAATTTTAGCTTTCACATTTT 119052 Query 48697 CCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAA 48756 | | || || || | || ||||| | ||||| ||||| ||||| | || || || | Sbjct 119051 CGATAGTATCAGAGGGTTCTACCTCTAGGGTAATGGTTTTACCCGTGAGGGTCTTAACGA 118992 Query 48757 AAATCTGCAT 48766 | |||||||| Sbjct 118991 AGATCTGCAT 118982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380881107906264