Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq53 95.1 2e-14 >seq53 Length=1573976 Score = 95.1 bits (104), Expect = 2e-14 Identities = 143/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 48167 ATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATT 48226 |||||| | || || ||| || || ||||||| || |||| || ||||| ||||| Sbjct 796310 ATGAGCTCATTTGAAAAGGTAAGTCCTGGCATGAGACCTCTCTTCTTAAGCCAAAAAATA 796251 Query 48227 GCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCT 48286 || || || |||||||| ||||| || || || || || || ||||| | ||||| Sbjct 796250 GCAGCAAAGGAGCCAGAAAAGAAAATTCCTTCAACAGCAGCAAACGCTACTATTCTCTCA 796191 Query 48287 CCGAAAGAAGCGTTCTTGTCTG-AGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGAT 48345 || |||| || | | ||| ||||||| ||||| ||||| || ||||||||||| | Sbjct 796190 CCAAAAGTGGCCGTGG-GACTGGAGATCCAAGAAAGTGCCCAATCAGCCTTCTTCTTAAC 796132 Query 48346 GCATGGCATCGTCTCTATGGC 48366 || ||| || || ||||| Sbjct 796131 ACACTCCATGGTTTCGATGGC 796111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931391113861120