Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq1287 107 2e-18 >seq1287 Length=463317 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||||||||| ||||||||||| || ||||| || || | ||| || || Sbjct 100269 AATGCAAATTTTTGTTAAAACTTTAACCGGAAAAACAATCACACTAGAAGTAGAACCTTC 100210 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || ||| | | | || ||| || ||| ||||||||||| | || |||||| Sbjct 100209 TGACACTATTGAAAATGTTAAAGCTAAAATTCAGGATAAAGAAGGAATTCCACCGGATCA 100150 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||||||||||| ||| || ||||| || || || | | ||| || | || ||||| Sbjct 100149 GCAGAGACTTATTTTTGCTGGGAAACAACTTGAAGATGGCCGAACCTTGTCTGATTACAA 100090 Query 107735 CATTCAAAAGGAGTCTACGTTGCA 107758 ||| || ||||| || || |||| Sbjct 100089 CATCCAGAAGGAATCAACCCTGCA 100066 Score = 86.0 bits (94), Expect = 5e-12 Identities = 144/208 (69%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||||||||||||||| || ||||||| ||||||||||| | ||| ||| || Sbjct 101865 AATGCAAATTTTTGTCAAGACACTAACAGGAAAAACCATTACATTAGAAGTGGAACCTTC 101806 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || ||| | | | || ||| || ||| ||||||||||| | || ||||| Sbjct 101805 TGACACTATTGAAAATGTTAAAGCTAAAATTCAGGATAAAGAAGGAATTCCGCCAGATCA 101746 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGACT 107730 ||| || || || | ||| || |||||| |||| |||||| || | | || | Sbjct 101745 GCAAAGGCTGATCTTTGCAGGAAAACAGTTGGAAGATGGACGC----ACCCTTTCTGATT 101690 Query 107731 ACAACATTCAAAAGGAGTCTACGTTGCA 107758 |||| |||||||| || || || |||| Sbjct 101689 ACAATATTCAAAAAGAATCCACACTGCA 101662 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||||||||| |||||| | || || || || || || | ||| ||| | Sbjct 100952 ATGCAAATTTTTGTTAAAACTCTCACTGGAAAGACTATCACTTTGGAAGTTGAGCCATCT 100893 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| | | | || ||| || ||| ||||||||||| | || |||||| Sbjct 100892 GATACTATTGAGAACGTTAAAGCCAAAATTCAGGATAAAGAAGGAATTCCACCGGATCAA 100833 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 |||||| | |||| ||| || || ||||| || || | | ||| | | || ||||| Sbjct 100832 CAGAGATTGATTTTTGCTGGAAAGCAGCTTGAAGATGGCCGAACCCTTTCAGATTACAAT 100773 Query 107736 ATTCAAAAGGAGTCTACGTTGCA 107758 ||||||||||| || || || || Sbjct 100772 ATTCAAAAGGAATCCACCTTACA 100750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398817647567752