Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq241 98.7 2e-15 seq157 91.5 3e-13 seq1287 86.0 1e-11 >seq241 Length=1307498 Score = 98.7 bits (108), Expect = 2e-15 Identities = 188/277 (68%), Gaps = 0/277 (0%) Strand=Plus/Minus Query 58369 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGT 58428 ||||| || ||| | |||||||| ||| | || ||| |||||| | ||||| | Sbjct 850811 GATAGTCAATGCAGTGTGGTGGTATTATTTTTCAAAACTTTTAGAATTTTGTGATACCTT 850752 Query 58429 GTTTTTCATACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTT 58488 || || ||||||||||||||| || || | | |||||||| || || ||||| | Sbjct 850751 CTTCTTTATACTTAGGAAAAAGGAAAAGCAATTGACATTTCTACATGTTTACCATCACTC 850692 Query 58489 TACTATGTTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAGGCATTTTT 58548 || |||||| | ||| | ||| | |||||||| ||| || || | || ||||||| Sbjct 850691 AACAATGTTTTCATTATGGTGGATTGGTATTAAGTGGGTTCCAAGTGGATCTACATTTTT 850632 Query 58549 CGGCGCTCAGTTGAATTCTTTTATCCATGTTATTATGTATAGTTATTATGGTATGGCGGC 58608 ||| | | ||||| || || ||||| | |||||| |||||||| | || || Sbjct 850631 ACCCGCAATGGTCAATTCATTCATTCATGTATTGATGTATCTATATTATGGCTTAGCAGC 850572 Query 58609 GTGTGGACATATGTTTAAAAAGTATTTATGGTGGAAG 58645 ||||| | | || ||||| ||||||||| Sbjct 850571 ACTTGGACCCAACATAGGCAAATATTTGTGGTGGAAG 850535 >seq157 Length=2235682 Score = 91.5 bits (100), Expect = 3e-13 Identities = 138/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 183009 AACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGCA 183068 ||| ||||| || ||||| | |||| || || | ||| ||||||||| || || Sbjct 10229 AACGCATGATGACCTTTGGAACTCGACACAGATTCAACTTGTGAAAGAAGGAAAGATACA 10170 Query 183069 TAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAGA 183128 | | ||||| |||||||| ||||||||||| ||| | ||||||||| | |||| ||| | Sbjct 10169 TGGCTTTTTGCGAATGTATTGGGCTAAAAAAATATTAGAATGGACAGAATCTCCTGAAAA 10110 Query 183129 TGCTTTGAGTTATAG-TATCTATATGAACAATAAGTACGAACTAGACGGTACGGATCCTA 183187 ||||| || || | || || | || |||| ||| |||| |||| |||||| | Sbjct 10109 AGCTTT-AGAAATTGCCATTTACTTAAATGATAAATACAGTTTAGATGGTAGGGATCCAA 10051 Query 183188 ACGGATACGTAGGT 183201 | |||| || ||| Sbjct 10050 ATGGATTTGTTGGT 10037 >seq1287 Length=463317 Score = 86.0 bits (94), Expect = 1e-11 Identities = 102/139 (73%), Gaps = 11/139 (8%) Strand=Plus/Plus Query 81644 AGAGTAAATTCCTTCTGTATATTATAATCAGATAGAGT-------TCTACAGTCTTCT-- 81694 |||||| |||| || || || ||||||||||| ||||| ||| || || || Sbjct 102349 AGAGTAGATTCTTTTTGAATGTTATAATCAGAAAGAGTACGTCCATCTTCAAGCTGCTTT 102408 Query 81695 --AACAAAGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCT 81752 | |||| || | ||| |||||| | ||| | || ||||||||||||| |||||||| Sbjct 102409 CCAGCAAAAATCAATCTCTGTTGATCAGGAGGGATACCTTCCTTATCTTGGATCTTTGCC 102468 Query 81753 TTTATATTTTCAATCGTAT 81771 || | ||||||||| |||| Sbjct 102469 TTCACATTTTCAATAGTAT 102487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903273791156480