Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq2523 107 5e-18 seq53 89.7 1e-12 >seq2523 Length=169028 Score = 107 bits (118), Expect = 5e-18 Identities = 130/175 (74%), Gaps = 8/175 (5%) Strand=Plus/Plus Query 110988 TATGAAAAAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAA--- 111044 |||||||| |||||| ||| |||||| || ||||| || || ||| ||| Sbjct 121301 TATGAAAATGAAGGCCGCTTTGTAAAACAAGTTGAAGCTCGTGATCTCTGG---AAAGCT 121357 Query 111045 ATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAAT 111104 ||| ||||||| |||||||||||||| ||||| || |||||||||||| | ||| Sbjct 121358 ATCATTGAATCTCAAGTTGAAACTGGTGTACCTTACATGTTGTATAAAGATTCTTGCAAT 121417 Query 111105 CGCAAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAA--TTTGTGCTG 111157 | ||||| ||||| | ||| ||||||| ||||||| |||||| ||||| ||| Sbjct 121418 AGGAAATCAAATCAGAAAAATCTAGGAACTATTAAGTGTAGTAATCTTTGTACTG 121472 Score = 104 bits (114), Expect = 6e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 110522 TTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGA 110581 ||| ||||| |||| || | || || |||||||||||||||| || |||| ||| | Sbjct 113693 TTGTTTTCTACTAGCCATGCAAGAGGACAGTATTGAAGGTATTTATAATACTCTGAAACA 113752 Query 110582 AACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTC 110641 | | || | || || |||| ||||||| |||||| | || || ||| || | | Sbjct 113753 ATCAGCATTAATATCCAAAACTGCTGGAGGCATTGGTGTGCATGTCCATTGCATCAGAGC 113812 Query 110642 AAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAG 110701 ||||| || ||| || |||| ||| ||||| ||| ||||| ||||||||||| Sbjct 113813 TAAAGGGACATTTATTGCTGGCACGAATGGTATTTCAAATGGTCTTGTCCCAATGTTAAG 113872 Query 110702 AGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAA 110743 ||| || || | || || |||||| ||||||| ||||| Sbjct 113873 AGTTTTTAATAATACAGCTCGATATGTTGATCAAGGAGGTAA 113914 >seq53 Length=1573976 Score = 89.7 bits (98), Expect = 1e-12 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131858 AGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATC 131917 ||| | ||||| |||||| ||||||||| || |||||||| || | || |||||| Sbjct 796195 AGAATAGTAGCGTTTGCTGCTGTTGAAGGAATTTTCTTTTCTGGCTCCTTTGCTGCTATT 796254 Query 131918 TTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCG 131977 ||||||||||||||| | || | ||||| ||||| | || || ||| | |||| || Sbjct 796255 TTTTGGCTTAAGAAGAGAGGTCTCATGCCAGGACTTACCTTTTCAAATGAGCTCATATCT 796314 Query 131978 AGAGATGAAGCATT 131991 ||||||| | ||| Sbjct 796315 CGAGATGAGGTATT 796328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186627772917448