Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq2095 100 9e-18 seq476 100 9e-18 seq101 100 9e-18 seq432 98.7 3e-17 seq87 98.7 3e-17 seq75 98.7 3e-17 >seq2095 Length=188978 Score = 100 bits (110), Expect = 9e-18 Identities = 80/96 (83%), Gaps = 3/96 (3%) Strand=Plus/Plus Query 2748 CATCTTTGTACTGTGTTTATG---GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAA 2804 ||| ||| || | | ||||| || ||| |||||||||||||||||| |||||||||| Sbjct 91055 CATTTTTTTAATTGGCTTATGCAAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAA 91114 Query 2805 GATCTAAAGGTCCCTGGTTCAACCCCGGGCTTCAGC 2840 |||||||||||||||||||| | |||||| ||| || Sbjct 91115 GATCTAAAGGTCCCTGGTTCGATCCCGGGTTTCGGC 91150 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 90088 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 90147 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 90148 CCGGGTTTCGGC 90159 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 95426 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 95485 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 95486 CCGGGTTTCGGC 95497 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 113483 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 113542 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 113543 CCGGGTTTCGGC 113554 >seq476 Length=819732 Score = 100 bits (110), Expect = 9e-18 Identities = 74/84 (88%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 2759 TGTGTTT-ATG-GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTC 2816 ||||| | ||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct 461872 TGTGTATCATGAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTC 461931 Query 2817 CCTGGTTCAACCCCGGGCTTCAGC 2840 |||||||| | |||||| ||| || Sbjct 461932 CCTGGTTCGATCCCGGGTTTCGGC 461955 >seq101 Length=821951 Score = 100 bits (110), Expect = 9e-18 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 171308 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 171367 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 171368 CCCGGGTTTCGGC 171380 >seq432 Length=1208846 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 108345 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 108404 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 108405 CCGGGTTTCGGC 108416 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 109366 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 109307 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 109306 CCGGGTTTCGGC 109295 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 112084 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 112143 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 112144 CCGGGTTTCGGC 112155 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 118683 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 118742 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 118743 CCGGGTTTCGGC 118754 >seq87 Length=2490591 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 908604 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 908663 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 908664 CCGGGTTTCGGC 908675 >seq75 Length=1082948 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 711190 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 711249 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 711250 CCGGGTTTCGGC 711261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15847490616360