Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq1287 123 2e-23 seq1631 86.0 6e-12 >seq1287 Length=463317 Score = 123 bits (136), Expect = 2e-23 Identities = 157/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| ||||| |||||||||||| | ||||| | ||||| ||| | Sbjct 100268 ATGCAAATTTTTGTTAAAACTTTAACCGGAAAAACAATCACACTAGAAGTAGAACCTTCT 100209 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || ||||| || | || ||| |||||| |||||||| || || || || |||||| Sbjct 100208 GACACTATTGAAAATGTTAAAGCTAAAATTCAGGATAAAGAAGGAATTCCACCGGATCAG 100149 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCGATTACA 25352 || ||||| |||| | || |||||||| ||||||| ||| |||| ||||||| Sbjct 100148 CAGAGACTTATTTTTGCTGGGAAACAACTTGAAGATGGCCGAACCTTGTC--TGATTACA 100091 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386 | || || || ||||| ||| | |||||||| || Sbjct 100090 ACATCCAGAAGGAATCAACCCTGCATTTAGTTTT 100057 Score = 111 bits (122), Expect = 1e-19 Identities = 166/231 (72%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 ||||||| | ||||| ||||| | || ||||| | ||||| | ||||| || |||| Sbjct 100953 CATGCAAATTTTTGTTAAAACTCTCACTGGAAAGACTATCACTTTGGAAGTTGA-GCCAT 100895 Query 25234 C-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATC 25292 | |||||||| ||| | || ||| |||||| |||||||| || || || || |||| Sbjct 100894 CTGATACTATTGAGAACGTTAAAGCCAAAATTCAGGATAAAGAAGGAATTCCACCGGATC 100835 Query 25293 AGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTA 25350 | || ||| | |||| | || || || || ||||||| ||| | |||| |||| Sbjct 100834 AACAGAGATTGATTTTTGCTGGAAAGCAGCTTGAAGATGGCCGAACCCTTTCAG--ATTA 100777 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||||||| ||||||||| | ||| | || | | | |||||||| Sbjct 100776 CAATATTCAAAAGGAATCCACCTTACATCTTGTACTTCGTCTTAGAGGAGG 100726 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| ||||| ||||| || ||| | || || | ||||| ||| ||| | Sbjct 100496 ATGCAAATTTTTGTTAAAACTTTAACTGGGAAAACAATTACATTGGAAGTTGAA-CCATC 100438 Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 |||||||| || | || ||| |||||| ||||| || || || || || ||||| Sbjct 100437 AGATACTATTGAAAACGTTAAAGCTAAAATTCAGGATAAGGAAGGAATTCCTCCAGATCA 100378 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 ||| ||| | |||| | ||||||||| | ||||||| | | || ||||| || Sbjct 100377 GCAGAGATTGATTTTTGCTGGCAAACAATTAGAAGATGGGCGCACCCTCTCTGATTATAA 100318 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 ||| ||||| ||||| || | ||| | || | | |||||||||||| Sbjct 100317 TATCCAAAAGGAATCAACATTGCATCTTGTACTTCGTCTGAGAGGAGGAA 100268 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || ||||| |||||||| || | ||||| | ||||| ||| | Sbjct 101180 ATGCAAATTTTCGTTAAAACTTTAACCGGCAAGACCATCACCCTGGAAGTTGAACCTTCA 101121 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| || || | || || |||||| |||||||| || || || || ||||| Sbjct 101120 GATACCATTGAAAATGTTAAGGCTAAAATTCAGGATAAAGAAGGAATTCCACCTGATCAA 101061 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || ||| | |||| | || |||||||| ||||||| | | | || |||||| ||| Sbjct 101060 CAGAGATTAATTTTTGCTGGTAAACAACTAGAAGATGGTCGTACCCTCTCCGATTATAAT 101001 Query 25355 ATTCAAAAAGAATCCAC 25371 || |||||||||||||| Sbjct 101000 ATCCAAAAAGAATCCAC 100984 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || ||| |||| |||||| | || || | ||||| ||| | Sbjct 101864 ATGCAAATTTTTGTCAAGACACTAACAGGAAAAACCATTACATTAGAAGTGGAACCTTCT 101805 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || ||||| || | || ||| |||||| |||||||| || || ||||| |||||| Sbjct 101804 GACACTATTGAAAATGTTAAAGCTAAAATTCAGGATAAAGAAGGAATTCCGCCAGATCAG 101745 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||||| || || | | || ||||| | ||||||| | | | ||||||||| Sbjct 101744 CAAAGGCTGATCTTTGCAGGAAAACAGTTGGAAGATGGACGCACCCTTTCTGATTACAAT 101685 Query 25355 ATTCAAAAAGAATCCAC 25371 ||||||||||||||||| Sbjct 101684 ATTCAAAAAGAATCCAC 101668 Score = 104 bits (114), Expect = 2e-17 Identities = 150/207 (72%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| ||||| | ||||| || | |||||| | ||||| ||| ||| | Sbjct 102320 ATGCAAATATTTGTTAAAACTCTTACCGGCAAGACAATCACGCTGGAAGTTGAA-CCATC 102262 Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || ||||| || | || ||| |||||| |||||||| || ||||| || || || Sbjct 102261 TGACACTATTGAAAATGTCAAAGCGAAAATTCAAGATAAAGAAGGAATACCCCCTGACCA 102202 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTAC 25351 ||| | | |||| | || |||||||| ||||||| ||| | |||| |||| Sbjct 102201 GCAGCGTTTAATTTTTGCTGGAAAACAACTTGAAGATGGGCGAACCCTTTCAG--ATTAT 102144 Query 25352 AATATTCAAAAAGAATCCACCATTCAT 25378 |||||||||||||| ||||| ||||| Sbjct 102143 AATATTCAAAAAGAGTCCACTCTTCAT 102117 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| ||||| | ||||| || | |||||| | ||||| ||| | Sbjct 100724 ATGCAAATTTTTGTTAAAACTCTTACCGGCAAGACAATCACGCTGGAAGTTGAACCTTCA 100665 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| || || | || || |||||| |||||||| || || || || ||||| Sbjct 100664 GATACCATTGAAAATGTGAAGGCTAAAATTCAGGATAAAGAAGGAATTCCACCAGATCAA 100605 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | | |||| | || |||||||||||||||| ||| | |||||||| Sbjct 100604 CAACGTTTGATTTTTGCTGGAAAACAACTCGAAGATGGCCGAACCCTTTCTGATTACAAC 100545 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 ||||| || ||||| || ||||||| || | | |||||||| |||| Sbjct 100544 ATTCAGAAGGAATCTACTCTTCATTTGGTCCTGCGTTTGAGAGGTGGAA 100496 Score = 96.9 bits (106), Expect = 3e-15 Identities = 164/233 (70%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 |||||| | || || || || ||||||| ||| | || || | ||||| || ||| Sbjct 103005 CATGCAGATCTTCGTCAAGACTCTAACCGGTAAAACAATTACATTAGAAGTTGA-GCCTT 102947 Query 25234 C-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATC 25292 | || || || || | || || |||||| |||||||| || || || || || | Sbjct 102946 CAGACACAATTGAAAATGTTAAGGCCAAAATTCAAGATAAAGAAGGAATTCCACCAGACC 102887 Query 25293 AGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCGATTA 25350 | |||||||| |||| | ||||||||||| ||||||| | | ||||| ||||| Sbjct 102886 AACAAAGACTGATTTTTGCTGGCAAACAACTAGAAGATGGCCGTACCTTGTCA--GATTA 102829 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 |||||| || || ||||| || ||||| | || ||| | ||||||| |||| Sbjct 102828 CAATATCCAGAAGGAATCTACTCTTCATCTGGTCTTACGTCTGAGAGGTGGAA 102776 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| ||||| | || || ||| | ||||| | ||||| ||| | Sbjct 102548 ATGCAGATTTTTGTTAAAACTCTGACTGGCAAAACAATCACACTGGAAGTTGAACCTTCA 102489 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||||||| || | || || ||| || ||||| || ||||| || || ||||| Sbjct 102488 GATACTATTGAAAATGTGAAGGCAAAGATCCAAGATAAGGAAGGTATCCCTCCTGATCAA 102429 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || ||| | |||| | || || || || ||||||| | | | | ||||| || Sbjct 102428 CAGAGATTGATTTTTGCTGGAAAGCAGCTTGAAGATGGACGTACTCTTTCTGATTATAAC 102369 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGT 25383 |||||||||||||| || |||||||||| Sbjct 102368 ATTCAAAAAGAATCTACTCTTCATTTAGT 102340 Score = 82.4 bits (90), Expect = 7e-11 Identities = 145/207 (70%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || || || || |||| || ||| |||| || | ||||| || ||| | Sbjct 101408 ATGCAGATCTTCGTCAAGACTCTAACTGGTAAAACGATTACATTAGAAGTTGA-GCCTTC 101350 Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || || ||||| | || || |||||| |||||||| || || || || || || Sbjct 101349 AGACACCATCGAAAATGTTAAGGCTAAAATTCAAGATAAAGAAGGAATTCCTCCTGACCA 101290 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCGATTAC 25351 ||| | | || | || || |||||||||||||||| ||| ||||| ||||| Sbjct 101289 GCAGCGTTTGATCTTCGCTGGAAAACAACTCGAAGATGGCCGAACCCTGTCA--GATTAT 101232 Query 25352 AATATTCAAAAAGAATCCACCATTCAT 25378 ||||| |||||||| ||||| ||||| Sbjct 101231 AATATACAAAAAGAGTCCACTCTTCAT 101205 >seq1631 Length=286364 Score = 86.0 bits (94), Expect = 6e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || || || || | || || ||| | || || | || || ||| || Sbjct 118982 ATGCAGATCTTCGTTAAGACCCTCACGGGTAAAACCATTACCCTAGAGGTAGAACCCTCT 119041 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||||||||| | || ||| |||||| || ||||| || ||||| || ||||| Sbjct 119042 GATACTATCGAAAATGTGAAAGCTAAAATTCAAGACAAAGAAGGAATACCTCCAGATCAA 119101 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || || || |||| | || |||||| | ||||||| |||| | || ||||||||| Sbjct 119102 CAGAGGCTTATTTTTGCTGGTAAACAATTGGAAGATGGAAGAACTCTCTCTGATTACAAT 119161 Query 25355 ATTCAAAAAG 25364 || ||||||| Sbjct 119162 ATACAAAAAG 119171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445026701141760