Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1287 120 3e-22 >seq1287 Length=463317 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 ||||||||||||| | || || ||||| | ||| || ||||||||||| ||||| | Sbjct 102320 TTCCACCACGTAAACGCAGGACTAAATGAAGAGTAGATTCTTTTTGAATGTTATAATCAG 102379 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | || || | || || |||||||| || ||||| ||||| | ||| || || | || Sbjct 102380 AAAGAGTACGTCCATCTTCAAGCTGCTTTCCAGCAAAAATCAATCTCTGTTGATCAGGAG 102439 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 | | | ||||| || ||||||| ||||| | || | | || || | ||| | Sbjct 102440 GGATACCTTCCTTATCTTGGATCTTTGCCTTCACATTTTCAATAGTATCTGAAGGTTCAA 102499 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 | |||| ||||| ||||| || |||| |||||| ||||| |||||||||| Sbjct 102500 CTTCCAGTGTGATTGTTTTGCCAGTCAGAGTTTTAACAAAAATCTGCATTC 102550 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 ||||||||||||| | | || |||||||| || ||||| |||||||| ||||| | Sbjct 101864 TTCCACCACGTAAACGTAGAACTAAATGTAAGGTTGATTCCTTCTGAATGTTATAATCAG 101923 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 || || || | || |||| ||| || || ||||| ||||| || ||||| || | | Sbjct 101924 ACAGAGTACGACCATCTTCCAACTGTTTTCCTGCAAAGATCAAACGTTGCTGATCTGGTG 101983 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686 ||| | |||||| | | ||| ||| || || | | || | | || || | |||| Sbjct 101984 GAATACCCTCCTTAT-CTTGAATTTTAGCTTTAACATTTTCAATTGTATCAGAAGGTTCC 102042 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||| || ||||| || || || ||||| ||||||||||| ||||| Sbjct 102043 ACTTCCAATGTAATCGTCTTTCCTGTTAAAGTCTTCACAAATATTTGCAT 102092 Score = 96.9 bits (106), Expect = 3e-15 Identities = 150/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 || |||||||| ||| || || |||||||||||||| | | || || | || || Sbjct 102568 ACTAAATGTAAAGTAGATTCTTTCTGAATGTTGTAATCTGAAAGAGTACGGCCATCTTCA 102627 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 |||||||| || |||||||| || | ||| ||||| | ||| | | || |||| | || Sbjct 102628 AGCTGCTTTCCAGCAAATATTAATCTCTGTTGGTCTGGAGGGATTCCTTCTTTGT-CTTG 102686 Query 35648 ATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 | ||| | ||| | | || | | ||||| | || || |||| || || ||||| Sbjct 102687 AATTTTAGCCTTGACATTTTCGATTGTGTCAGAAGGCTCAACTTCCAATGTAATTGTTTT 102746 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 ||| || |||||||| ||||| || ||||||| Sbjct 102747 ACCAGTTAAAGTTTTAACAAAAATTTGCATTC 102778 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 ||||||| | || | || |||||||| | ||| ||||| |||||||||||||| | Sbjct 100496 TTCCACCTCTCAAACGCAGGACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCAG 100555 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | |||||| | || || || || || || ||||| ||||| || || || || | | Sbjct 100556 AAAGGGTTCGGCCATCTTCGAGTTGTTTTCCAGCAAAAATCAAACGTTGTTGATCTGGTG 100615 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686 ||| | || || ||| ||| ||| | ||||| | || | | || || | ||| Sbjct 100616 GAATTCCTTCTTTATCC-TGAATTTTAGCCTTCACATTTTCAATGGTATCTGAAGGTTCA 100674 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||| |||||| || || || || | |||||| ||||| || ||||| Sbjct 100675 ACTTCCAGCGTGATTGTCTTGCCGGTAAGAGTTTTAACAAAAATTTGCAT 100724 Score = 91.5 bits (100), Expect = 1e-13 Identities = 138/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || ||||||||||| | ||||||||| | || || || || || || ||||| Sbjct 100078 TCCTTCTGGATGTTGTAATCAGACAAGGTTCGGCCATCTTCAAGTTGTTTCCCAGCAAAA 100137 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGT 35664 || | | |||||| |||| |||| | || || ||| ||| ||| || || | | | Sbjct 100138 ATAAGTCTCTGCTGATCCGGTGGAATTCCTTCTTTATCC-TGAATTTTAGCTTTAACATT 100196 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| | ||| || || | ||||| ||||| || || |||||||| || Sbjct 100197 TTCAATAGTGTCAGAAGGTTCTACTTCTAGTGTGATTGTTTTTCCGGTTAAAGTTTTAAC 100256 Query 35725 AAATATCTGCATTC 35738 ||| || ||||||| Sbjct 100257 AAAAATTTGCATTC 100270 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| |||||||| || ||||| | | ||||||| | || || || || || || ||||| Sbjct 102129 CTCTTTTTGAATATTATAATCTGAAAGGGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAA 102188 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAG 35663 || || ||||||||||| | || | | || ||| | ||| ||| || || | | Sbjct 102189 AATTAAACGCTGCTGGTCAGGGGGTATTC-CTTCTTTATCTTGAATTTTCGCTTTGACAT 102247 Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| | ||| || |||| |||||| || || || || | |||||| | Sbjct 102248 TTTCAATAGTGTCAGATGGTTCAACTTCCAGCGTGATTGTCTTGCCGGTAAGAGTTTTAA 102307 Query 35724 CAAATATCTGCATTC 35738 ||||||| ||||||| Sbjct 102308 CAAATATTTGCATTC 102322 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 35533 ATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTG 35592 |||||| || ||||||||||| |||||||| | | |||||| | || || ||||| Sbjct 100749 ATGTAAGGTGGATTCCTTTTGAATATTGTAATCTGAAAGGGTTCGGCCATCTTCAAGCTG 100808 Query 35593 CTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 ||| || ||||| ||||| | ||| || |||| |||| | || || ||| ||| || Sbjct 100809 CTTTCCAGCAAAAATCAATCTCTGTTGATCCGGTGGAATTCCTTCTTTATCC-TGAATTT 100867 Query 35653 TTGCTTCAGAGTT-GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCG 35711 | |||| | ||| | | || || | || || |||| ||||| || || || | Sbjct 100868 TGGCTTTAACGTTCTCAATAGTATCAGATGGCTCAACTTCCAAAGTGATAGTCTTTCCAG 100927 Query 35712 TCAAAGTTTTCACAAATATCTGCAT 35736 | | |||||| ||||| || ||||| Sbjct 100928 TGAGAGTTTTAACAAAAATTTGCAT 100952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450725034293440