Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03]
12,168 sequences; 1,150,108,890 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq2523 127 3e-24
seq53 127 3e-24
>seq2523
Length=169028
Score = 127 bits (140), Expect = 3e-24
Identities = 154/207 (74%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778
|||||||| ||||| | ||||| | || ||||||||| || |||||||| | |||
Sbjct 123313 TGAAATTCACCAGAAAGTACTCTTCTTGTATAAATATTAGATGTGTATGGTTCAAATGAT 123254
Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838
|||||||| || | |||||||||||| || ||||||||||| ||||| | | ||| |
Sbjct 123253 TCATTATTGCCTAAAATTTGAGCAGTAGAAGCAGTTGGCATGGGTGCGATAAGCAAAGAA 123194
Query 68839 TTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCC-AATCCCAAAGATCAGA 68897
|| | | |||||| || ||||| ||||| | ||| || |||||||||||||||
Sbjct 123193 TTCCGTAATCCATGTTTTGAAATTTTTTCTTTCA-ATGCAGCCCAATCCCAAAGATCAGT 123135
Query 68898 TGGTACAACATTCCAAAGATCGTATTG 68924
||| || |||||| | ||| || ||
Sbjct 123134 TGGAGTAATATTCCACATATCATACTG 123108
Score = 100 bits (110), Expect = 4e-16
Identities = 199/294 (68%), Gaps = 3/294 (1%)
Strand=Plus/Minus
Query 69162 AGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTC 69221
|||||||||||| || ||||| || ||||| ||||| | || || || || |
Sbjct 121642 AGGATAATAATTTATGTCTATTATCTTATTTAGATTCCATGTAACAACCTTTGTTACAGC 121583
Query 69222 CTTTAGTTTGAGAAAATCAAATCGTCCATC---TATAACAAACATATTCAGTGCTACAGA 69278
|| | || ||||||| | | ||| | | | ||| || | | ||| | ||
Sbjct 121582 TTTCAACTTTTCAAAATCACAGGTTTTATCAGCTTTCATAAATTTACTTAATGCAATTGA 121523
Query 69279 TGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAG 69338
||||| ||||||||| || | |||| ||| | ||||| || || || ||||| ||
Sbjct 121522 TGCTAAATTACAAACAGCAATTTCATCTGAAGAAGTATATTCAATAATTTCAGTACAAAG 121463
Query 69339 ATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTT 69398
||||||||| || ||||| || ||||||| |||||| || | || || | || ||
Sbjct 121462 ATTACTACACTTAATAGTTCCTAGATTTTTCTGATTTGATTTCCTATTGCAAGAATCTTT 121403
Query 69399 GTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCA 69452
|| | || | || ||||||||||| |||||||| || |||| ||||||
Sbjct 121402 ATACAACATGTAAGGTACACCAGTTTCAACTTGAGATTCAATGATAGCTTTCCA 121349
Score = 91.5 bits (100), Expect = 2e-13
Identities = 107/142 (75%), Gaps = 2/142 (1%)
Strand=Plus/Minus
Query 69990 AGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATT 70049
|||| | ||| | |||||||| || || || || || || || |||||| |||| |||
Sbjct 113586 AGTTGCAGCACTGAATAATGTGGGTGAGGCATGTGTAAAATATCCTTCAGAGAGCAAATT 113527
Query 70050 GTATGTTTCAATAGCTGATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCA 70108
|||||||| |||| | | ||||||||| ||| ||| ||||| | || || | |||||
Sbjct 113526 GTATGTTTTAATAACAGCATCTATATCCTCAC-CATGGATTCCAACAGCAACCCTCATCA 113468
Query 70109 ACATATGCTGAGGTCGTTCTAC 70130
|||| || ||||||| ||| ||
Sbjct 113467 ACATGTGTTGAGGTCTTTCAAC 113446
>seq53
Length=1573976
Score = 127 bits (140), Expect = 3e-24
Identities = 164/226 (73%), Gaps = 3/226 (1%)
Strand=Plus/Minus
Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698
||||||||| | || | || || ||||| || ||||| ||||| ||||| | ||| |
Sbjct 796324 CCTCATCTCGAGATATGAGCTCATTTGAAAAGGTAAGTCCTGGCATGAGACCTCTCTTCT 796265
Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758
| |||||||| || |||||||| || ||||||||||| || ||||| || || ||||| |
Sbjct 796264 TAAGCCAAAAAATAGCAGCAAAGGAGCCAGAAAAGAAAATTCCTTCAACAGCAGCAAACG 796205
Query 39759 CAACAAGTCTCTCTCCGTAACT---TGTATCATTATGTATCCACTTCTGTGCCCAATCAG 39815
| || | |||||| || || | || | | ||||| ||||||||||||
Sbjct 796204 CTACTATTCTCTCACCAAAAGTGGCCGTGGGACTGGAGATCCAAGAAAGTGCCCAATCAG 796145
Query 39816 CTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATA 39861
| |||||||| ||||| ||| ||||| || ||||| || | |||
Sbjct 796144 CCTTCTTCTTAACACACTCCATGGTTTCGATGGCATTGAATAAATA 796099
Score = 114 bits (126), Expect = 2e-20
Identities = 101/126 (80%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 40103 TTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTC 40162
|| || | ||| ||||| ||||| |||||||| || || || || ||||||||||| |||
Sbjct 793942 TTAGAGAGATCAACTTCCTCAGCAGTCCAAAAGGATGCTTCAGCTTTTTTGTACATCTTC 793883
Query 40163 CATATATCACGATATTGTATTGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGGATG 40222
||||||||| |||||| ||||| ||||||||||| || |||| || | | ||||| |
Sbjct 793882 CATATATCATGATATTCAATTGGGAAAATAACAAACCTCCTTGGGTTATCTTTAAGGAGG 793823
Query 40223 GGTTCC 40228
||||||
Sbjct 793822 GGTTCC 793817
Score = 102 bits (112), Expect = 1e-16
Identities = 145/202 (72%), Gaps = 4/202 (2%)
Strand=Plus/Minus
Query 39442 AATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTAT 39501
|| ||||||||| ||||||||||| |||||| |||||||| |||||||||||||| ||
Sbjct 796802 AAGCAATCTATCAGCAACAAATTCGATGTATTGTTTCATCAGATCACAATTCATTCCAAT 796743
Query 39502 GAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCT--CTGTT 39559
| |||||| || || || || ||||| || | || ||| |||| || | ||| |
Sbjct 796742 CATCGCAACTGGCAGCGCTTCAGTCAGAAATTCCTGCTCTATGACTACAGCATTACTGAT 796683
Query 39560 ATTATCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAG 39619
| | ||| || || |||| || ||| || | | || || ||||| | ||
Sbjct 796682 AATTTCG--GTAACCCTCTCAACAGATGGTTTCTGAACAAGGTGCTTGAACATCAGACAA 796625
Query 39620 GCGAAGTCACAATGTAGGCCCT 39641
|||||||||||||| || ||||
Sbjct 796624 GCGAAGTCACAATGAAGACCCT 796603
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686804321171520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |