Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1287 129 5e-25 >seq1287 Length=463317 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | || || | ||| |||||||| || || ||||| || ||||| || || Sbjct 101410 CCTCCTCTTAAACGAAGTACTAAATGTAAGGTTGATTCTTTCTGGATATTATAATCAGAG 101469 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| | ||||| || |||||||| ||| |||| || | ||| ||||| || || Sbjct 101470 AGGGTGCGGCCATCTTCTAGTTGTTTACCAGCGAAAATCAGTCTCTGCTGATCAGGTGGA 101529 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| |||||||| || || ||| | |||||| || || | | ||||||| Sbjct 101530 ATACCTTCTTTATCCTGAATTTTAGCTTTAACATTTTCTATGGTATCAGATGGTTCAACT 101589 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || | ||||||| |||||| || | ||||||||||||||| |||||| || Sbjct 101590 TCCAAGGTTATAGTTTTGCCAGTTAAAGTTTTCACAAAGATCTGCATACCT 101640 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| ||||| ||| | ||| | || || |||||||||||||| || || Sbjct 102094 CCACCTCGCAGCCGCAGTACAAGATGAAGAGTGGACTCTTTTTGAATATTATAATCTGAA 102153 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | ||| | ||||| || ||||| || || |||| | |||||| || || || || Sbjct 102154 AGGGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAAATTAAACGCTGCTGGTCAGGGGGT 102213 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || |||||||| || || ||| | |||| | |||||| | | ||||||| Sbjct 102214 ATTCCTTCTTTATCTTGAATTTTCGCTTTGACATTTTCAATAGTGTCAGATGGTTCAACT 102273 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||||| || |||||||| ||||| |||||||| Sbjct 102274 TCCAGCGTGATTGTCTTGCCGGTAAGAGTTTTAACAAATATTTGCAT 102320 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || || || |||| || ||||| | ||||| ||||||||||| || || || Sbjct 102322 CCACCACGTAAACGCAGGACTAAATGAAGAGTAGATTCTTTTTGAATGTTATAATCAGAA 102381 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || | ||||| ||||| || || || |||| | | ||||||||| || || Sbjct 102382 AGAGTACGTCCATCTTCAAGCTGCTTTCCAGCAAAAATCAATCTCTGTTGATCAGGAGGG 102441 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| || ||||| |||||| |||| |||| | ||| |||| | ||||||| Sbjct 102442 ATACCTTCCTTATCTTGGATCTTTGCCTTCACATTTTCAATAGTATCTGAAGGTTCAACT 102501 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | |||||| ||||||||||| ||||| || ||||| Sbjct 102502 TCCAGTGTGATTGTTTTGCCAGTCAGAGTTTTAACAAAAATCTGCAT 102548 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 ||||||| | || || | ||| |||||||| || || ||||| |||||||| || || Sbjct 103004 TGCCTCCTCTTAAACGAAGTACTAAATGTAAGGTTGATTCTTTCTGAATATTATAATCTG 103063 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | |||| | ||||| ||||| || || || |||| | | |||||| || || | Sbjct 103064 AAAGGGTGCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGGG 103123 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || ||||| || ||| || || | |||| | ||||| | | ||||| Sbjct 103124 GAATTCCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCGATTGTGTCAGAAGGTTCAA 103183 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 |||||| ||| || | |||||| || |||||||| |||||||| ||||| Sbjct 103184 CTTCTAAAGTGATTGTTTTGCCAGTAAGAGTTTTAACAAAGATCTGCAT 103232 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097 ||| | |||||| || || || |||||||||||||| || | | | || | ||||| Sbjct 100743 TACAAGATGTAAGGTGGATTCCTTTTGAATATTGTAATCTGAAAGGGTTCGGCCATCTTC 100802 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 ||||| || || || |||| | | |||||||||||| || | || |||||||| Sbjct 100803 AAGCTGCTTTCCAGCAAAAATCAATCTCTGTTGATCCGGTGGAATTCCTTCTTTATCCTG 100862 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAACTTCTAGAGTTATAGATT 27216 || ||| ||| | | | || | ||| || | |||| |||||||| | ||| |||| | Sbjct 100863 AATTTTGGCTTTAACGTTCTCAATAGTATCAGATGGC-TCAACTTCCAAAGTGATAGTCT 100921 Query 27217 TGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || |||||||| ||||| |||||||| Sbjct 100922 TTCCAGTGAGAGTTTTAACAAAAATTTGCAT 100952 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 ||||||| | || || | ||||||||||| ||||| ||||| |||||||| || || Sbjct 103232 TGCCTCCTCTCAGACGAAGCACCAAATGTAATGTAGATTCTTTCTGAATATTATAATCTG 103291 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | |||| | ||||| ||||| || || || |||| | | |||||| || || | Sbjct 103292 AAAGTGTGCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGGG 103351 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || ||||| || || ||| || | |||||| ||||| | | |||| Sbjct 103352 GAATTCCTTCTTTGTCTTGAATTTTGGCCTTAACATTTTCTATTGTGTCAGAAGGCTCAA 103411 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 |||||| || || | |||||| || || || || || ||||| ||||| Sbjct 103412 CTTCTAATGTAATTGTTTTGCCGGTAAGTGTCTTGACGAAGATCTGCAT 103460 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| || | || | ||| | ||| | || || ||||||||||||||||| || Sbjct 101638 CCTCCACGAAGTCGAAGTACAAGATGCAGTGTGGATTCTTTTTGAATATTGTAATCAGAA 101697 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| | ||||| | |||||| || || | || || | || ||||| ||||| Sbjct 101698 AGGGTGCGTCCATCTTCCAACTGTTTTCCTGCAAAGATCAGCCTTTGCTGATCTGGCGGA 101757 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || |||||||| || || ||| | |||| | |||||| | | ||| ||| Sbjct 101758 ATTCCTTCTTTATCCTGAATTTTAGCTTTAACATTTTCAATAGTGTCAGAAGGTTCCACT 101817 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 |||| || || | ||| || || || || || ||||| |||||||| Sbjct 101818 TCTAATGTAATGGTTTTTCCTGTTAGTGTCTTGACAAAAATTTGCAT 101864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424871383290816