Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq1287 96.9 2e-15 >seq1287 Length=463317 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 ||||||||||||||| |||||| | || || ||| || ||| | || || ||| | Sbjct 100269 AATGCAAATTTTTGTTAAAACTTTAACCGGAAAAACAATCACACTAGAAGTAGAACCTTC 100210 Query 27849 CGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCA 27908 ||| | | || || ||| ||||| || |||||||| |||| ||| || Sbjct 100209 TGACACTATTGAAAATGTTAAAGCTAAAATTCAGGATAAAGAAGGAATTCCACCGGATCA 100150 Query 27909 GCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAA 27968 ||| | | |||||||| || |||||| | || || | || | |||||| |||||||| Sbjct 100149 GCAGAGACTTATTTTTGCTGGGAAACAACTTGAAGATGGCCGAACCTTGTCTGATTACAA 100090 Query 27969 CATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||| || || || ||||||| ||||||||| | | ||||| Sbjct 100089 CATCCAGAAGGAATCAACCCTGCATTTAGTTTTGCGTCTTAGGGGCGG 100042 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 ||||||||||||||| || || || || || ||| |||||| | || || ||| | Sbjct 101865 AATGCAAATTTTTGTCAAGACACTAACAGGAAAAACCATTACATTAGAAGTGGAACCTTC 101806 Query 27849 CGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCA 27908 ||| | | || || ||| ||||| || |||||||| ||||| || || Sbjct 101805 TGACACTATTGAAAATGTTAAAGCTAAAATTCAGGATAAAGAAGGAATTCCGCCAGATCA 101746 Query 27909 GCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAA 27968 |||| || | || ||||| |||||||| ||||| || | ||||| | | || |||||||| Sbjct 101745 GCAAAGGCTGATCTTTGCAGGAAAACAGTTGGAAGATGGACGCACCCTTTCTGATTACAA 101686 Query 27969 CATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 || |||||||| ||| ||||| | || | || | ||||| || Sbjct 101685 TATTCAAAAAGAATCCACACTGCATCTTGTACTTCGACTTCGTGGAGG 101638 Score = 89.7 bits (98), Expect = 4e-13 Identities = 161/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAA--AGC 27846 ||||||||||||||| |||||| | ||||||||| |||||| | || || ||| | | Sbjct 100497 AATGCAAATTTTTGTTAAAACTTTAACTGGGAAAACAATTACATTGGAAGTTGAACCATC 100438 Query 27847 ACCGACGATGTACAATCGGTCAAACAAAAAAT-AGCCGACAAAGAAGGTGTTCCGATGGA 27905 | || || | || || | || | |||| | || || || ||||| |||| || Sbjct 100437 AGATACTAT-TGAAAACGTTAAAGCTAAAATTCAG--GATAAGGAAGGAATTCCTCCAGA 100381 Query 27906 GCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTA 27965 ||||| | || |||||||| || |||||||| || || | |||| | | || ||||| Sbjct 100380 TCAGCAGAGATTGATTTTTGCTGGCAAACAATTAGAAGATGGGCGCACCCTCTCTGATTA 100321 Query 27966 CAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 || |||||||| || || |||||| | || | ||| || | || || Sbjct 100320 TAATATCCAAAAGGAATCAACATTGCATCTTGTACTTCGTCTGAGAGGAGG 100270 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 ||||||||| ||||| ||||||||||| || || || || | || || ||| | Sbjct 102321 AATGCAAATATTTGTTAAAACTCTTACCGGCAAGACAATCACGCTGGAAGTTGAACCATC 102262 Query 27849 CGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCA 27908 ||| | | || |||||| ||||| || |||||||| | || || || Sbjct 102261 TGACACTATTGAAAATGTCAAAGCGAAAATTCAAGATAAAGAAGGAATACCCCCTGACCA 102202 Query 27909 GCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAA 27968 ||| || ||||||||||| ||||||||| | || || | || | | | || ||||| || Sbjct 102201 GCAGCGTTTAATTTTTGCTGGAAAACAACTTGAAGATGGGCGAACCCTTTCAGATTATAA 102142 Query 27969 CATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 || ||||||||| |||| | ||| | || |||| |||| || || Sbjct 102141 TATTCAAAAAGAGTCCACTCTTCATCTTGTACTGCGGCTGCGAGGTGG 102094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355809626495736