Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1287 159 8e-34 seq1631 138 3e-27 >seq1287 Length=463317 Score = 159 bits (176), Expect = 8e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| |||||||||||||||||||| || |||||||| | ||||| | |||||| Sbjct 101197 AGTACAAGATGAAGAGTGGACTCTTTTTGTATATTATAATCTGACAGGGTTCGGCCATCT 101256 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || || || || |||||||| | || || ||||||||||||| |||||| || || Sbjct 101257 TCGAGTTGTTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATTCCTTCTTTATCT 101316 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || || || || || |||||||||||||| || ||||| || | || ||||| Sbjct 101317 TGAATTTTAGCCTTAACATTTTCGATGGTGTCTGAAGGCTCAACTTCTAATGTAATCGTT 101376 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || || |||||||| || || | ||||||| Sbjct 101377 TTACCAGTTAGAGTCTTGACGAAGATCTGCATT 101409 Score = 159 bits (176), Expect = 8e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | |||||||| || |||||||| ||||||||||| | ||| || | ||||||| Sbjct 102337 AGGACTAAATGAAGAGTAGATTCTTTTTGAATGTTATAATCAGAAAGAGTACGTCCATCT 102396 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || || || || | | ||||| |||||||| | |||||||| || Sbjct 102397 TCAAGCTGCTTTCCAGCAAAAATCAATCTCTGTTGATCAGGAGGGATACCTTCCTTATCT 102456 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| ||||| ||||| || || || || |||||| || || ||||| || Sbjct 102457 TGGATCTTTGCCTTCACATTTTCAATAGTATCTGAAGGTTCAACTTCCAGTGTGATTGTT 102516 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || || ||||| || ||||| | ||||||| Sbjct 102517 TTGCCAGTCAGAGTTTTAACAAAAATCTGCATT 102549 Score = 156 bits (172), Expect = 1e-32 Identities = 170/226 (75%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || |||||||| || ||||| || || ||||| |||||||| || || ||||| | ||| Sbjct 101640 TCCACGAAGTCGAAGTACAAGATGCAGTGTGGATTCTTTTTGAATATTGTAATCAGAAAG 101699 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 ||| | ||||||||||| ||| || ||||| ||||| || | ||| || || || |||| Sbjct 101700 GGTGCGTCCATCTTCCAACTGTTTTCCTGCAAAGATCAGCCTTTGCTGATCTGGCGGAAT 101759 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 |||||| || ||||| || || ||| || ||||| || |||||||| ||| || || Sbjct 101760 TCCTTCTTTATCCTGAATTTTAGCTTTAACATTTTCAATAGTGTCAGAAGGTTCCACTTC 101819 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 | || || || ||||| || || ||||| ||||| | |||||| Sbjct 101820 TAATGTAATGGTTTTTCCTGTTAGTGTCTTGACAAAAATTTGCATT 101865 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| |||||||||||||||||||| || |||||||| | |||||| | |||||| Sbjct 102109 AGTACAAGATGAAGAGTGGACTCTTTTTGAATATTATAATCTGAAAGGGTTCGCCCATCT 102168 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || || || || || || || | || || |||||||| || | |||||| || || Sbjct 102169 TCAAGTTGTTTTCCAGCAAAAATTAAACGCTGCTGGTCAGGGGGTATTCCTTCTTTATCT 102228 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || || || ||| || ||||| || |||||||| |||||| || || ||||| ||| Sbjct 102229 TGAATTTTCGCTTTGACATTTTCAATAGTGTCAGATGGTTCAACTTCCAGCGTGATTGTC 102288 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || || ||||| || ||||| | |||||| Sbjct 102289 TTGCCGGTAAGAGTTTTAACAAATATTTGCATT 102321 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| || | ||||| ||||||||||| |||||||| | ||||| | |||||| Sbjct 100969 AGAACAAGATGTAATGTGGATTCTTTTTGGATATTATAATCGGAGAGGGTACGACCATCT 101028 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || || || || || || || | | ||||| ||||| |||| |||||| || ||| Sbjct 101029 TCTAGTTGTTTACCAGCAAAAATTAATCTCTGTTGATCAGGTGGAATTCCTTCTTTATCC 101088 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || || || || || ||||| ||||| || || |||||| || || ||||| ||| Sbjct 101089 TGAATTTTAGCCTTAACATTTTCAATGGTATCTGAAGGTTCAACTTCCAGGGTGATGGTC 101148 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||| || || || | ||||| Sbjct 101149 TTGCCGGTTAAAGTTTTAACGAAAATTTGCAT 101180 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || || || || ||||||||||| | || || | |||||||||| ||| || ||| Sbjct 101896 GTTGATTCCTTCTGAATGTTATAATCAGACAGAGTACGACCATCTTCCAACTGTTTTCCT 101955 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || ||||| | ||||| || || || |||| || ||||| || || || || ||| Sbjct 101956 GCAAAGATCAAACGTTGCTGATCTGGTGGAATACCCTCCTTATCTTGAATTTTAGCTTTA 102015 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || ||||| || || ||||| ||| || || | || ||||||||||| || | |||| Sbjct 102016 ACATTTTCAATTGTATCAGAAGGTTCCACTTCCAATGTAATCGTCTTTCCTGTTAAAGTC 102075 Query 211098 TTTACAAACACCTGCAT 211114 || ||||| | ||||| Sbjct 102076 TTCACAAATATTTGCAT 102092 >seq1631 Length=286364 Score = 138 bits (152), Expect = 3e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 210925 CTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGA 210984 ||||||| || || ||||| | || || ||||||||||||| || || || || || | Sbjct 119171 CTTTTTGTATATTGTAATCAGAGAGAGTTCTTCCATCTTCCAATTGTTTACCAGCAAAAA 119112 Query 210985 TAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTT 211044 |||| | ||||| || ||||| | |||||| ||||| || || || |||||| |||| Sbjct 119111 TAAGCCTCTGTTGATCTGGAGGTATTCCTTCTTTGTCTTGAATTTTAGCTTTCACATTTT 119052 Query 211045 CGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAA 211104 |||| || |||||| ||| ||||| || || || || || |||||||| ||||| || | Sbjct 119051 CGATAGTATCAGAGGGTTCTACCTCTAGGGTAATGGTTTTACCCGTGAGGGTCTTAACGA 118992 Query 211105 ACACCTGCATT 211115 | | ||||||| Sbjct 118991 AGATCTGCATT 118981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158971285305320