Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq1287 107 2e-18 >seq1287 Length=463317 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| || ||| ||||||||| ||||||||||| | ||| ||||| | || ||||| || Sbjct 102117 ATGAAGAGTGGACTCTTTTTGAATATTATAATCTGAAAGGGTTCGCCCATCTTCAAGTTG 102176 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 ||| || ||||| || | |||||||||||| | ||| | | ||||| || ||||| Sbjct 102177 TTTTCCAGCAAAAATTAAACGCTGCTGGTCAGGGGGTATTCCTTCTTTATCTTGAATTTT 102236 Query 39201 CTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 | ||||| | | | || || | || || |||| |||||| | || || || Sbjct 102237 CGCTTTGACATTTTCAATAGTGTCAGATGGTTCAACTTCCAGCGTGATTGTCTTGCCGGT 102296 Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284 || ||||||||||| |||||||| Sbjct 102297 AAGAGTTTTAACAAATATTTGCAT 102320 Score = 98.7 bits (108), Expect = 9e-16 Identities = 172/247 (70%), Gaps = 4/247 (2%) Strand=Plus/Plus Query 39039 TAACTAAAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTT 39098 |||| ||||||| || |||||||| | || | || | ||||| ||| || || Sbjct 100709 TAACAAAAATTTG--CATACCTCCTCTAAGACGAAGTACAAGATGTAAGGTGGATTCCTT 100766 Query 39099 TTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAG 39158 ||| ||||| ||||| | ||| ||||| | || |||||||| || || ||||| || | Sbjct 100767 TTGAATATTGTAATCTGAAAGGGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAA 100826 Query 39159 ACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT-CGCCA 39217 | ||| || || | || | | ||||| ||| ||| ||| | || | ||| | | | Sbjct 100827 TCTCTGTTGATCCGGTGGAATTCCTTCTTTATCC-TGAATTTTGGCTTTAACGTTCTCAA 100885 Query 39218 CCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGA 39277 ||||| | ||| || |||| |||||| | ||||| || || ||||||||||| | Sbjct 100886 TAGTATCAGATGGCTCAACTTCCAAAGTGATAGTCTTTCCAGTGAGAGTTTTAACAAAAA 100945 Query 39278 TTTGCAT 39284 ||||||| Sbjct 100946 TTTGCAT 100952 Score = 82.4 bits (90), Expect = 7e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || ||||||||| | || | ||||||||||| || ||||| || ||||||||||| Sbjct 103230 CATGCCTCCTCTCAGACGAAGCACCAAATGTAATGTAGATTCTTTCTGAATATTATAATC 103289 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 | |||||| || | || |||||||| || || ||||| || | | ||| ||||| | Sbjct 103290 TGAAAGTGTGCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATTAATCTCTGTTGGTCTGG 103349 Query 39174 GGGCACGCTCTCTTTGTC 39191 ||| | | |||||||| Sbjct 103350 GGGAATTCCTTCTTTGTC 103367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429481899461384