Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1287 149 1e-30 seq1013 111 4e-19 seq12168 107 5e-18 seq64 107 5e-18 seq1603 87.8 4e-12 >seq1287 Length=463317 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | ||| ||||| || |||||||| |||||||| | ||| ||||| | || ||| Sbjct 101188 CGCAGCCGCAGTACAAGATGAAGAGTGGACTCTTTTTGTATATTATAATCTGACAGGGTT 101247 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | |||||||| || || || ||||||||||| | || || ||||| || ||||| ||| Sbjct 101248 CGGCCATCTTCGAGTTGTTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATTCCT 101307 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 || || ||||| || || ||| ||| ||||||||||||||| | || || ||||| Sbjct 101308 TCTTTATCTTGAATTTTAGCCTTAACATTTTCGATGGTGTCTGAAGGCTCAACTTCTAAT 101367 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || ||||| || || || | ||| || | ||| | |||||| Sbjct 101368 GTAATCGTTTTACCAGTTAGAGTCTTGACGAAGATCTGCATT 101409 Score = 147 bits (162), Expect = 5e-30 Identities = 161/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| | || ||||| ||||||||||| | || ||||| | | ||| | ||||| Sbjct 102336 CAGGACTAAATGAAGAGTAGATTCTTTTTGAATGTTATAATCAGAAAGAGTACGTCCATC 102395 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| |||||||| ||||| || || | || ||||| || || || ||||||||||| || Sbjct 102396 TTCAAGCTGCTTTCCAGCAAAAATCAATCTCTGTTGATCAGGAGGGATACCTTCCTTATC 102455 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||||| ||||||| ||| || || ||||| | ||| || || | ||||| || Sbjct 102456 TTGGATCTTTGCCTTCACATTTTCAATAGTATCTGAAGGTTCAACTTCCAGTGTGATTGT 102515 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| |||| |||||| | || | |||||| Sbjct 102516 TTTGCCAGTCAGAGTTTTAACAAAAATCTGCATT 102549 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||| || | |||||||||||||||| ||| ||||||| | || | |||||| Sbjct 100969 AGAACAAGATGTAATGTGGATTCTTTTTGGATATTATAATCGGAGAGGGTACGACCATCT 101028 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 ||||| || || ||||| || || | || ||||| || || ||||| ||||| || || Sbjct 101029 TCTAGTTGTTTACCAGCAAAAATTAATCTCTGTTGATCAGGTGGAATTCCTTCTTTATCC 101088 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || || || ||| ||| ||| ||||| ||||| | ||| || || | ||||| ||| Sbjct 101089 TGAATTTTAGCCTTAACATTTTCAATGGTATCTGAAGGTTCAACTTCCAGGGTGATGGTC 101148 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || |||||||| | ||| | |||||| Sbjct 101149 TTGCCGGTTAAAGTTTTAACGAAAATTTGCAT 101180 Score = 136 bits (150), Expect = 9e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 225504 GACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTC 225563 ||| || || ||||| ||||| || |||| ||||||||| | ||| || | |||||||| Sbjct 102795 GACCAGATGAAGAGTAGATTCCTTCTGGATATTGTAATCTGACAAGGTACGGCCATCTTC 102854 Query 225564 TAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTG 225623 ||| || || ||||| || || |||| ||||||||| || ||||| ||||| || ||||| Sbjct 102855 TAGTTGTTTGCCAGCAAAAATCAGTCTTTGTTGGTCTGGTGGAATTCCTTCTTTATCTTG 102914 Query 225624 GATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTT 225683 || || ||| ||| ||| || |||||||| | || || ||||| || || || || Sbjct 102915 AATTTTGGCCTTAACATTTTCAATTGTGTCTGAAGGCTCAACTTCTAATGTAATTGTTTT 102974 Query 225684 GCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || | ||| || | ||| | ||||| Sbjct 102975 ACCGGTTAGAGTCTTGACGAAGATCTGCAT 103004 Score = 131 bits (144), Expect = 4e-25 Identities = 138/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || |||||||| || | ||| ||||| | | || | |||||||| |||||||| ||| Sbjct 103036 GTTGATTCTTTCTGAATATTATAATCTGAAAGGGTGCGGCCATCTTCAAGCTGCTTTCCA 103095 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 || || || | || |||||||| || ||||| ||||| ||||||||||| || ||| Sbjct 103096 GCAAAAATTAATCTCTGTTGGTCTGGGGGAATTCCTTCTTTGTCTTGGATTTTAGCCTTG 103155 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 ||| |||||| ||||| || | ||| || ||||| ||||| || ||||| || | |||| Sbjct 103156 ACATTTTCGATTGTGTCAGAAGGTTCAACTTCTAAAGTGATTGTTTTGCCAGTAAGAGTT 103215 Query 225697 TT 225698 || Sbjct 103216 TT 103217 Score = 127 bits (140), Expect = 5e-24 Identities = 164/224 (73%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||| || ||||| || || |||||||||||||| | ||||||||| | | || Sbjct 101643 ACGAAGTCGAAGTACAAGATGCAGTGTGGATTCTTTTTGAATATTGTAATCAGAAAGGGT 101702 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | ||| || || || ||||| || | ||| || || |||||||| || Sbjct 101703 GCGTCCATCTTCCAACTGTTTTCCTGCAAAGATCAGCCTTTGCTGATCTGGCGGAATTCC 101762 Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 ||| || || || || ||| || || ||| ||| || ||||| || | |||||| |||| Sbjct 101763 TTCTTTATCCTGAAT-TTTAGCTTTAACATTTTCAATAGTGTCAGAAGGTTCCACTTCTA 101821 Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 | || || || || || || | || || | || | ||||||| Sbjct 101822 ATGTAATGGTTTTTCCTGTTAGTGTCTTGACAAAAATTTGCATT 101865 Score = 111 bits (122), Expect = 4e-19 Identities = 136/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || |||||||| |||| ||| ||||| | | || | ||||||||||| || || ||| Sbjct 101440 GTTGATTCTTTCTGGATATTATAATCAGAGAGGGTGCGGCCATCTTCTAGTTGTTTACCA 101499 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC-TT 225635 ||||| || |||| || || || || ||||||||||| || || || || ||| || || Sbjct 101500 GCGAAAATCAGTCTCTGCTGATCAGGTGGAATACCTTCTTTATCCTGAAT-TTTAGCTTT 101558 Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695 ||| ||| ||||| || || | ||| || || || || || || ||||| || ||||| Sbjct 101559 AACATTTTCTATGGTATCAGATGGTTCAACTTCCAAGGTTATAGTTTTGCCAGTTAAAGT 101618 Query 225696 TTT 225698 ||| Sbjct 101619 TTT 101621 Score = 104 bits (114), Expect = 6e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||| || | || ||||| ||||||| ||| ||||| | | || | ||||||| Sbjct 100285 AGTACAAGATGCAATGTTGATTCCTTTTGGATATTATAATCAGAGAGGGTGCGCCCATCT 100344 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 |||| || || ||||| || || | || || || || || ||||| |||||||| || Sbjct 100345 TCTAATTGTTTGCCAGCAAAAATCAATCTCTGCTGATCTGGAGGAATTCCTTCCTTATCC 100404 Query 225622 TGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 || || ||| || || || ||| || || ||||| | ||| || || || || || || Sbjct 100405 TGAAT-TTTAGCTTTAACGTTTTCAATAGTATCTGATGGTTCAACTTCCAATGTAATTGT 100463 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || || |||||||| | || | ||||||| Sbjct 100464 TTTCCCAGTTAAAGTTTTAACAAAAATTTGCATT 100497 >seq1013 Length=402240 Score = 111 bits (122), Expect = 4e-19 Identities = 85/101 (84%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 370670 AATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCT 370729 |||||||| || ||||||||||| ||||||||||||||||| ||||| || ||||| ||| Sbjct 181777 AATTCAGGGTGTCCAAAAAATCAAAATAAATGTTGATAAAGAATAGGGTCTCCTCCTCCT 181718 Query 370730 GATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 ||||| |||||||| |||||| |||||| || ||||| Sbjct 181717 GATGGGTCAAAAAAAGAGGTATTACAATTTCGGTCTGTTAA 181677 >seq12168 Length=16518 Score = 107 bits (118), Expect = 5e-18 Identities = 83/99 (84%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||| || || ||||| ||||| ||||||||||||||||| ||||| || ||||| ||||| Sbjct 2116 TTCGGGGTGCCCAAAGAATCAAAATAAATGTTGATAAAGAATAGGGTCTCCTCCTCCTGA 2057 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 ||| |||||||| ||||||||||||| |||||||| Sbjct 2056 TGGGTCAAAAAAAGAGGTATTAAAATTTCGGTCAGTTAA 2018 >seq64 Length=2902381 Score = 107 bits (118), Expect = 5e-18 Identities = 83/99 (84%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||||| ||| ||||||||||| |||||||||||||| || |||||||| ||||| |||| Sbjct 2366903 TTCAGAATGCCCAAAAAATCAAAATAAATGTTGATATAGAATAGGATCTCCTCCTGCTGA 2366962 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 ||||| ||| || ||||||||| |||| || |||||| Sbjct 2366963 TGGATGAAATAATGAAGTATTAAATTTTCGATGAGTTAA 2367001 >seq1603 Length=210736 Score = 87.8 bits (96), Expect = 4e-12 Identities = 82/103 (80%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727 ||| ||||| |||| |||||||| | ||||||||||||||||| || ||||| ||||| Sbjct 160020 ATACTTCAG-ATGAACAAAAAATTAAAATAAATGTTGATAAAGAATGGGATCTCCTCCTT 159962 Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 |||||| ||||| || || ||||| |||| |||||| || Sbjct 159961 CTGATGAGTCAAAGAATGAGGTGTTAAAGTTTCGATCAGTAAA 159919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192345281404592