Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq1631 100 2e-16 seq1287 82.4 6e-11 >seq1631 Length=286364 Score = 100 bits (110), Expect = 2e-16 Identities = 139/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 101049 CTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATA 101108 ||||||| ||||||||||| | | |||| | ||||||||||||||| || ||| | | Sbjct 119171 CTTTTTGTATATTGTAATCAGAGAGAGTTCTTCCATCTTCCAATTGTTTACCAGCAAAAA 119112 Query 101109 TAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGG 101168 ||||||| ||||| ||| || | ||||||||||| |||||| |||||||| Sbjct 119111 TAAGCCTCTGTTGATCTGGAGGTATTCCTTCTTTGTCTTGAATTTTAGCTTTCACATTTT 119052 Query 101169 CCACCGTCTCTGTGGACGTTGT--TTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAAT 101226 | | || || | || ||| | || | |||||| ||||| ||||| | || |||| Sbjct 119051 CGATAGTATCAGAGG--GTTCTACCTCTAGGGTAATGGTTTTACCCGTGAGGGTCTTAAC 118994 Query 101227 AAAAATTTGCATT 101239 || || |||||| Sbjct 118993 GAAGATCTGCATT 118981 >seq1287 Length=463317 Score = 82.4 bits (90), Expect = 6e-11 Identities = 143/206 (69%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 101036 TGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGT 101095 |||| || ||||||||||||||||||||||| | | || ||||||||| ||| Sbjct 101662 TGCAGTGTGGATTCTTTTTGAATATTGTAATCAGAAAGGGTGCGTCCATCTTCCAACTGT 101721 Query 101096 TTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTT 101155 || || ||| | || |||||||| || ||| || | |||||||| || |||||| Sbjct 101722 TTTCCTGCAAAGATCAGCCTTTGCTGATCTGGCGGAATTCCTTCTTTATCCTGAATTTTA 101781 Query 101156 TGTTTCACATCGGCCACCGTCTCTGTGGACGTT--GTTTCGACGGTAATAGTTTTGCCCG 101213 ||| |||| | | || || | | ||| ||| | ||||| ||||| || | Sbjct 101782 GCTTTAACATTTTCAATAGTGTC--AGAAGGTTCCACTTCTAATGTAATGGTTTTTCCTG 101839 Query 101214 TCAATGTTTTAATAAAAATTTGCATT 101239 | | ||| || | ||||||||||||| Sbjct 101840 TTAGTGTCTTGACAAAAATTTGCATT 101865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409600048327512