Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2523 123 3e-23 seq53 111 2e-19 >seq2523 Length=169028 Score = 123 bits (136), Expect = 3e-23 Identities = 133/176 (76%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 |||||||| ||||| | |||||| | || ||||||||| || |||||||| | ||| Sbjct 123313 TGAAATTCACCAGAAAGTACTCTTCTTGTATAAATATTAGATGTGTATGGTTCAAATGAT 123254 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 ||||| || || ||||||||||||||||||||||||||||| ||||| | | ||| | Sbjct 123253 TCATTATTGCCTAAAATTTGAGCAGTAGAAGCAGTTGGCATGGGTGCGATAAGCAAAGAA 123194 Query 77247 TTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATC 77302 || | | |||||| || ||||| ||||| | ||||||||||||||| Sbjct 123193 TTCCGTAATCCATGTTTTGAAATTTTTTCTTTCAATGCAGCCCAATCCCAAAGATC 123138 Score = 105 bits (116), Expect = 9e-18 Identities = 205/299 (69%), Gaps = 9/299 (3%) Strand=Plus/Minus Query 77570 AGGATAATAATTAATGTCTATAATTTTATTGAGATTTC---TAACAACTACTTTAACCAC 77626 |||||||||||| |||||||| || ||||| ||||| | ||||||| |||| || Sbjct 121642 AGGATAATAATTTATGTCTATTATCTTATTTAGATTCCATGTAACAAC--CTTTGTT-AC 121586 Query 77627 GTCCTTTAGTTTAAGAAAATCAAATCTTCCATC---TATAACAAACATGTTCAAAGCTAT 77683 | || | || ||||||| | || ||| | | | ||| | | || || || Sbjct 121585 AGCTTTCAACTTTTCAAAATCACAGGTTTTATCAGCTTTCATAAATTTACTTAATGCAAT 121526 Query 77684 AGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACA 77743 ||||||| ||||||||| || | |||| | | ||||| || || || ||||| Sbjct 121525 TGATGCTAAATTACAAACAGCAATTTCATCTGAAGAAGTATATTCAATAATTTCAGTACA 121466 Query 77744 TAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTC 77803 ||||||||||| || ||||| || ||||||| || || || ||||||| || || Sbjct 121465 AAGATTACTACACTTAATAGTTCCTAGATTTTTCTGATTTGATTTCCTATTGCAAGAATC 121406 Query 77804 CTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGA 77862 ||||| | || | || || ||||||| || ||||| || |||| |||||||| Sbjct 121405 TTTATACAACATGTAAGGTACACCAGTTTCAACTTGAGATTCAATGATAGCTTTCCAGA 121347 Score = 104 bits (114), Expect = 3e-17 Identities = 125/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 78744 CTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATA 78803 ||||| | ||| || ||||| || || ||||| || |||||||||| ||||| || | Sbjct 109417 CTAAAAACTTTCTTGGTTTCTTTATGAAGATTTGAAACAGCTATTCGAGCAGCAAGTAAG 109358 Query 78804 GCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAAC 78863 |||||||||||||||| ||| || || || ||| |||| || || | | |||| ||| Sbjct 109357 GCATAATCAGGATGTTTTGTGGTCATTGTAGCAGCTGTTTCAGCAGCAAGATTATCCAAC 109298 Query 78864 TCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTTCATGGCGAT 78913 || | || || || ||| ||| || || |||||||||||| | ||| Sbjct 109297 TCAACCGTAGTCACGCCAGGATAAAGACCAGAAATAACTTTCATAGTGAT 109248 Score = 102 bits (112), Expect = 1e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457 |||| | ||| | |||||||| || || ||||| ||||| || |||||| || | ||| Sbjct 113586 AGTTGCAGCACTGAATAATGTGGGTGAGGCATGTGTAAAATATCCTTCAGAGAGCAAATT 113527 Query 78458 GTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAA 78517 |||||||| |||| | | ||||| ||| ||| ||||| || || || | |||||| Sbjct 113526 GTATGTTTTAATAACAGCATCTATATCCTCACCATGGATTCCAACAGCAACCCTCATCAA 113467 Query 78518 CATATGCTGAGGTCTTTCAAC 78538 ||| || |||||||||||||| Sbjct 113466 CATGTGTTGAGGTCTTTCAAC 113446 Score = 96.9 bits (106), Expect = 5e-15 Identities = 161/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212 ||||||||||| ||||| | ||||| || || |||||| ||||||| |||||||| | | Sbjct 113917 TTATTACCTCCTTGATCAACATATCGAGCTGTATTATTAAAAACTCTTAACATTGGGACA 113858 Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272 | ||| || || | ||||| || |||| |||| | | || | || | || | Sbjct 113857 AGACCATTTGAAATACCATTCGTGCCAGCAATAAATGTCCCTTTAGCTCTGAT----GCA 113802 Query 78273 ATGGATAT----CCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGT 78328 ||||| || || || ||||| || | || ||||||| || | |||||| || Sbjct 113801 ATGGACATGCACACCAATGCCTCCAGCAGTTTTGGATATTAATGCTGATTGTTTCAGAGT 113742 Query 78329 ATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTA 78380 || || ||||| || |||||||| || |||| || |||||||| ||| Sbjct 113741 ATTATAAATACCTTCAATACTGTCCTCTTGCATGGCTAGTAGAAAACAACTA 113690 Score = 91.5 bits (100), Expect = 2e-13 Identities = 150/213 (70%), Gaps = 14/213 (7%) Strand=Plus/Minus Query 77355 GATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAAT 77414 |||||| | || || ||||| ||||| | | |||||| | ||||||||| || || | | Sbjct 122991 GATCCACTGTAAGTCTCATATGGTCCATATTCTTCAGCCAATTCACAACTAGCCTCAAGT 122932 Query 77415 GCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGA--TCTTGT-GCTTCAATACTA 77471 || || ||||| | ||||| ||||||| || || ||| || | |||||| || Sbjct 122931 GCACCATAATACAAAGTTTCAAAAATCTGTTTGTTCAGAAGTCCAGCAGCTTCA---CTT 122875 Query 77472 TCAAACGGATA----ATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACC 77527 ||||| || | || | || ||||||| || || | || ||||||||||| || Sbjct 122874 TCAAATGGCAACCTCATTTGAATGAATAAA----TCAGCAAGCCCTTGAACTCCAATGCC 122819 Query 77528 AATAGGTCTATGTCTCTTATTGGAAATTTTAGC 77560 |||||| | ||||||| | || || ||| ||| Sbjct 122818 AATAGGACGATGTCTCATGTTAGATCTTTGAGC 122786 Score = 84.2 bits (92), Expect = 3e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984 |||||||| | |||||| |||| |||| ||| || || || ||||| | | Sbjct 114272 TCAAATTCTTTACCCCAAGTATCAGCCAACTTAGGACAGATATGGGGACACATTAGACTC 114213 Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044 || | |||| || || |||| |||||| | ||| |||||||| || ||| || Sbjct 114212 CATTTTCCATTAGACTGTACACGTTCCATAAACAAATCTGGTATCCAAAGGGCATAGAAC 114153 Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104 ||||||| | | |||||| || || ||||||||||| | ||| || || || | | Sbjct 114152 AGATCTCTAGCACGTACTTCTTCTTTACCAGTATTCTTTTTTAAATCAAGGAATTCAAAA 114093 Query 78105 ATATCAGAATGCCATGGTTCTAGATA 78130 ||||| | |||||| || || ||||| Sbjct 114092 ATATCTGCATGCCAAGGCTCAAGATA 114067 >seq53 Length=1573976 Score = 111 bits (122), Expect = 2e-19 Identities = 100/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 48627 TTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTC 48686 || || | ||| ||||| ||||| |||||||| ||||| || |||||||| ||||| ||| Sbjct 793942 TTAGAGAGATCAACTTCCTCAGCAGTCCAAAAGGATGCTTCAGCTTTTTTGTACATCTTC 793883 Query 48687 CATATATCACTGTATTGGATTGGGAAAATAACAAATCTATTTGGATTTTTTGCAAGGATA 48746 ||||||||| |||| ||||||||||||||||| || |||| || | | ||||| Sbjct 793882 CATATATCATGATATTCAATTGGGAAAATAACAAACCTCCTTGGGTTATCTTTAAGGAGG 793823 Query 48747 GGTTCC 48752 |||||| Sbjct 793822 GGTTCC 793817 Score = 109 bits (120), Expect = 8e-19 Identities = 169/239 (71%), Gaps = 8/239 (3%) Strand=Plus/Minus Query 48146 AAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGG 48205 || || |||| || |||| |||||| | || | || || ||||| || || || || Sbjct 796340 AATATAACAAGTAATACCT-CATCTCGAGATATGAGCTCATTTGAAAAGGTAAGTCCTGG 796282 Query 48206 CATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCC 48265 ||| || || | || || |||||||| || || || || || ||||||||||| || || Sbjct 796281 CATGAGACCTCTCTTCTTAAGCCAAAAAATAGCAGCAAAGGAGCCAGAAAAGAAAATTCC 796222 Query 48266 TTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGT-----TGTGTATC 48320 ||| || || ||||| || | |||||| || || |||| ||| || ||| Sbjct 796221 TTCAACAGCAGCAAACGCTACTATTCTCTCACCAAAAGTGGC--CGTGGGACTGGAGATC 796164 Query 48321 CACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 48379 || |||||||||||||||||||||| ||||| ||| ||||| || ||||| || Sbjct 796163 CAAGAAAGTGCCCAATCAGCCTTCTTCTTAACACACTCCATGGTTTCGATGGCATTGAA 796105 Score = 86.0 bits (94), Expect = 9e-12 Identities = 142/200 (71%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 47966 AATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTAT 48025 || || |||||| ||||| ||||| || ||| |||||||| |||||||||||||| || Sbjct 796802 AAGCAATCTATCAGCAACAAATTCGATGTATTGTTTCATCAGATCACAATTCATTCCAAT 796743 Query 48026 AAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACT-A 48084 | |||||| || || || || ||||| || || || || ||||||| ||| | Sbjct 796742 CATCGCAACTGGCAGCGCTTCAGTCAGAAATTCCTGCTCTATGACTACAGCAT-TACTGA 796684 Query 48085 TTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAA-ATGTTTAAACATTAAACAT 48143 | || || ||| | || || |||| | ||||| || || ||||| | ||| Sbjct 796683 TAATTTCGGTAACCCTCTCAACAGATGGTTTCT-GAACAAGGTGCTTGAACATCAGACAA 796625 Query 48144 GCAAAATCACAATGAAGACC 48163 || || |||||||||||||| Sbjct 796624 GCGAAGTCACAATGAAGACC 796605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694563140875520