Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2523 123 4e-23 seq53 107 3e-18 >seq2523 Length=169028 Score = 123 bits (136), Expect = 4e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 |||||||| ||||| | |||||||| || ||||||||| || |||||||| | ||| Sbjct 123313 TGAAATTCACCAGAAAGTACTCTTCTTGTATAAATATTAGATGTGTATGGTTCAAATGAT 123254 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 ||||| || || |||||||||||||| |||||||| ||||| ||||| | | ||| | Sbjct 123253 TCATTATTGCCTAAAATTTGAGCAGTAGAAGCAGTTGGCATGGGTGCGATAAGCAAAGAA 123194 Query 75842 TTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAT 75901 || | | |||||| || ||||| ||||| | ||||||||||||||| | | Sbjct 123193 TTCCGTAATCCATGTTTTGAAATTTTTTCTTTCAATGCAGCCCAATCCCAAAGATCAGTT 123134 Query 75902 GGTACAACATCCCAGAGATCGTATTG 75927 || || || ||| | ||| || || Sbjct 123133 GGAGTAATATTCCACATATCATACTG 123108 Score = 105 bits (116), Expect = 1e-17 Identities = 161/227 (71%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 |||||||| | |||||| |||| |||| |||||| || |||||||| | | Sbjct 114272 TCAAATTCTTTACCCCAAGTATCAGCCAACTTAGGACAGATATGGGGACACATTAGACTC 114213 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || | |||| || || |||| |||||| | ||| |||||||| || ||| || Sbjct 114212 CATTTTCCATTAGACTGTACACGTTCCATAAACAAATCTGGTATCCAAAGGGCATAGAAC 114153 Query 76640 AGATCTCGGGTTC-TACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCAT 76698 ||||||| | | ||| |||||| || || ||||||||||| | ||| ||||| || | Sbjct 114152 AGATCTCTAGCACGTAC-TTCTTCTTTACCAGTATTCTTTTTTAAATCAAGGAATTCAAA 114094 Query 76699 AATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTC 76745 |||||| | |||||| || || ||||| | ||| | |||| |||| Sbjct 114093 AATATCTGCATGCCAAGGCTCAAGATAAACCGCAAATGCACCTGGTC 114047 Score = 104 bits (114), Expect = 3e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052 |||| | ||| | || ||||| || || ||||| || || || |||||| || | ||| Sbjct 113586 AGTTGCAGCACTGAATAATGTGGGTGAGGCATGTGTAAAATATCCTTCAGAGAGCAAATT 113527 Query 77053 GTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAA 77112 |||||||| |||||| || ||||||||| ||| ||||| ||||| || | |||||| Sbjct 113526 GTATGTTTTAATAACAGCATCTATATCCTCACCATGGATTCCAACAGCAACCCTCATCAA 113467 Query 77113 CATATGCTGAGGTCGTTCTACA 77134 ||| || ||||||| ||| ||| Sbjct 113466 CATGTGTTGAGGTCTTTCAACA 113445 Score = 104 bits (114), Expect = 3e-17 Identities = 201/296 (68%), Gaps = 3/296 (1%) Strand=Plus/Minus Query 76165 AGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTC 76224 ||| |||||||| || ||||| || ||||| ||||| | ||| || || || | Sbjct 121642 AGGATAATAATTTATGTCTATTATCTTATTTAGATTCCATGTAACAACCTTTGTTACAGC 121583 Query 76225 CTTTAGTTTGAGAAAATCAAA---TTTTCCATCTATCACAAACATATTAAGAGCTATAGA 76281 || | || ||||||| | ||| || || ||| ||| || | | || || || Sbjct 121582 TTTCAACTTTTCAAAATCACAGGTTTTATCAGCTTTCATAAATTTACTTAATGCAATTGA 121523 Query 76282 TGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAG 76341 ||||| ||||||||| || | |||| | | | ||||| || || || || || || Sbjct 121522 TGCTAAATTACAAACAGCAATTTCATCTGAAGAAGTATATTCAATAATTTCAGTACAAAG 121463 Query 76342 ATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTT 76401 |||||||||||| |||||||| ||||||| || || || | || || || || || Sbjct 121462 ATTACTACACTTAATAGTTCCTAGATTTTTCTGATTTGATTTCCTATTGCAAGAATCTTT 121403 Query 76402 ATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGA 76457 ||| | | | || |||||||||| || ||||| || |||| |||||||| Sbjct 121402 ATACAACATGTAAGGTACACCAGTTTCAACTTGAGATTCAATGATAGCTTTCCAGA 121347 Score = 96.9 bits (106), Expect = 5e-15 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 77337 CGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAA 77396 ||||||| | ||| || ||||| || || ||||| || || ||||||| |||||| || | Sbjct 109419 CGCTAAAAACTTTCTTGGTTTCTTTATGAAGATTTGAAACAGCTATTCGAGCAGCAAGTA 109360 Query 77397 TTGCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTA 77456 ||||| |||||||||| ||| || || || ||| |||| || || | | |||| | Sbjct 109359 AGGCATAATCAGGATGTTTTGTGGTCATTGTAGCAGCTGTTTCAGCAGCAAGATTATCCA 109300 Query 77457 ATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCAT 77502 | || | ||||| || || ||| || || |||||||||||| Sbjct 109299 ACTCAACCGTAGTCACGCCAGGATAAAGACCAGAAATAACTTTCAT 109254 Score = 86.0 bits (94), Expect = 9e-12 Identities = 149/213 (70%), Gaps = 14/213 (7%) Strand=Plus/Minus Query 75950 GATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAAC 76009 |||||| | || || || || | || | | |||||| | ||| ||||| ||||| | Sbjct 122991 GATCCACTGTAAGTCTCATATGGTCCATATTCTTCAGCCAATTCACAACTAGCCTCAAGT 122932 Query 76010 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGA--TCTTGC-GCTTCAAGACTA 76066 ||||| ||||| | ||||| ||||||| || || ||| || || |||||| || Sbjct 122931 GCACCATAATACAAAGTTTCAAAAATCTGTTTGTTCAGAAGTCCAGCAGCTTCA---CTT 122875 Query 76067 TCAAAAGGATA----ATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACC 76122 ||||| || | || | || |||||||| | || || || ||||||||||| || Sbjct 122874 TCAAATGGCAACCTCATTTGAATGAATAAAT----CAGCAAGCCCTTGAACTCCAATGCC 122819 Query 76123 AATAGGTCTATGTCTCTTATTGGAAATTTCAGC 76155 |||||| | ||||||| | || || ||| ||| Sbjct 122818 AATAGGACGATGTCTCATGTTAGATCTTTGAGC 122786 >seq53 Length=1573976 Score = 107 bits (118), Expect = 3e-18 Identities = 155/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 ||||||| | || | || || ||||| || || || ||||| || || | ||| || Sbjct 796322 TCATCTCGAGATATGAGCTCATTTGAAAAGGTAAGTCCTGGCATGAGACCTCTCTTCTTA 796263 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 |||||||| ||||| || || || ||||||||||| || ||||| ||||| || || || Sbjct 796262 AGCCAAAAAATAGCAGCAAAGGAGCCAGAAAAGAAAATTCCTTCAACAGCAGCAAACGCT 796203 Query 46774 ACAAGTCTCTCTCCGTAACTGGC---ATCATTATGAATCCACCTTTGAGCCCAATCAGCC 46830 || | |||||| || || |||| | | ||||| | |||||||||||| Sbjct 796202 ACTATTCTCTCACCAAAAGTGGCCGTGGGACTGGAGATCCAAGAAAGTGCCCAATCAGCC 796143 Query 46831 TTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 46868 || ||||| ||||| ||| ||||| || ||||| || Sbjct 796142 TTCTTCTTAACACACTCCATGGTTTCGATGGCATTGAA 796105 Score = 96.9 bits (106), Expect = 5e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 47116 TTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTC 47175 || || | ||| ||||| ||||| ||||| || || || || |||||||| ||||| ||| Sbjct 793942 TTAGAGAGATCAACTTCCTCAGCAGTCCAAAAGGATGCTTCAGCTTTTTTGTACATCTTC 793883 Query 47176 CATATATCACGATATTGGATCGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGTATA 47235 ||||||||| |||||| || || ||||||||||| || |||| || | | ||| | Sbjct 793882 CATATATCATGATATTCAATTGGGAAAATAACAAACCTCCTTGGGTTATCTTTAAGGAGG 793823 Query 47236 GGTTCC 47241 |||||| Sbjct 793822 GGTTCC 793817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712825962677760