Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1287 100 2e-16 >seq1287 Length=463317 Score = 100 bits (110), Expect = 2e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||| || ||||| ||||| | || || | || |||| ||| || || |||||| Sbjct 101902 TCCTTCTGAATGTTATAATCAGACAGAGTACGACCATCTTCCAACTGTTTTCCTGCAAAG 101961 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA-TGT 44265 |||||||| |||||||||| || | ||| ||||| | | | | || |||| || | Sbjct 101962 ATCAAACGTTGCTGATCTGGTGGAATACCCTCCTTAT-CTTGAATTTTAGCTTTAACATT 102020 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | || || || | | |||||| |||| |||||||||||||| || | |||||||| Sbjct 102021 TTCAATTGTATCAGAAGGTTCCACTTCCAATGTAATCGTCTTTCCTGTTAAAGTCTTCAC 102080 Query 44326 GAAGATTTGCAT 44337 || |||||||| Sbjct 102081 AAATATTTGCAT 102092 Score = 98.7 bits (108), Expect = 7e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| ||||||| | || |||| ||||| || ||||| || |||||||| Sbjct 100491 TTGCATTCCACCTCTCAAACGCAGGACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTA 100550 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || || | || || || || || || ||||| |||||||| || ||||| Sbjct 100551 ATCAGAAAGGGTTCGGCCATCTTCGAGTTGTTTTCCAGCAAAAATCAAACGTTGTTGATC 100610 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || || | ||||| || ||| || || ||||| || | ||||| || | | Sbjct 100611 TGGTGGAATTCCTTCTTTATCCTGAATTTTAGCCTTCACATTTTCAATGGTATCTGAAGG 100670 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || |||| ||| || ||||| || || || || || || || |||||||| Sbjct 100671 TTCAACTTCCAGCGTGATTGTCTTGCCGGTAAGAGTTTTAACAAAAATTTGCAT 100724 Score = 93.3 bits (102), Expect = 3e-14 Identities = 163/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| |||||||| | | || || || | || ||||||||||| || || Sbjct 100263 TTGCATTCCTCCTCTCAGACGAAGTACAAGATGCAATGTTGATTCCTTTTGGATATTATA 100322 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | ||| |||| | || || | || || || ||||| ||||| | ||||||||| Sbjct 100323 ATCAGAGAGGGTGCGCCCATCTTCTAATTGTTTGCCAGCAAAAATCAATCTCTGCTGATC 100382 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG-TTCCTATGGTGTCGGCGG 44282 || ||| | |||||||| ||| | | || |||| || | || | || || || | | Sbjct 100383 TGGAGGAATTCCTTCCTTATCC-TGAATTTTAGCTTTAACGTTTTCAATAGTATCTGATG 100441 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || |||| ||||| || || || || | || || || || |||||||| Sbjct 100442 GTTCAACTTCCAATGTAATTGTTTTCCCAGTTAAAGTTTTAACAAAAATTTGCAT 100496 Score = 93.3 bits (102), Expect = 3e-14 Identities = 161/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || |||| ||| | || || || ||||| ||| ||| ||||| || || || Sbjct 101175 TTGCATACCACCTCGCAGCCGCAGTACAAGATGAAGAGTGGACTCTTTTTGTATATTATA 101234 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || || | || || || || || || || ||||||||||||||||| || Sbjct 101235 ATCTGACAGGGTTCGGCCATCTTCGAGTTGTTTTCCAGCGAAGATCAAACGCTGCTGGTC 101294 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 | ||| | ||||| || || || || ||| | || | |||||||| | | Sbjct 101295 AGGAGGAATTCCTTCTTTATCTTGAATTTTAGCCTTAACATTTTCGATGGTGTCTGAAGG 101354 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | |||||||| || || || || ||||| |||||||| ||||| Sbjct 101355 CTCAACTTCTAATGTAATCGTTTTACCAGTTAGAGTCTTGACGAAGATCTGCAT 101408 Score = 86.0 bits (94), Expect = 5e-12 Identities = 162/237 (68%), Gaps = 1/237 (0%) Strand=Plus/Plus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || |||| ||| | || || || ||||| ||| ||| ||||| || || Sbjct 102084 TATTTGCATACCACCTCGCAGCCGCAGTACAAGATGAAGAGTGGACTCTTTTTGAATATT 102143 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 ||||| | || ||| | || || || || || || ||||| || ||||||||||| Sbjct 102144 ATAATCTGAAAGGGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAAATTAAACGCTGCTG 102203 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGC 44280 || | || | ||||| || || || ||| || | || | || ||||| | Sbjct 102204 GTCAGGGGGTATTCCTTCTTTATCTTGAATTTTCGCTTTGACATTTTCAATAGTGTCAGA 102263 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||| || |||| ||| || ||||| || || || || || || || |||||||| Sbjct 102264 TGGTTCAACTTCCAGCGTGATTGTCTTGCCGGTAAGAGTTTTAACAAATATTTGCAT 102320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359937014323656