Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq91 89.7 7e-13 seq276 87.8 2e-12 >seq91 Length=3084333 Score = 89.7 bits (98), Expect = 7e-13 Identities = 205/305 (67%), Gaps = 8/305 (3%) Strand=Plus/Minus Query 50491 TTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTAC-ATAAATTGCGACGTAAATTAC 50549 |||| || |||||||||||||||||||| || | || | || ||| | | |||| Sbjct 98031 TTTATGGCTTTCAATGGAGACATTTTGGTGCCAGATATGACAACATGCATTCTGA-TTAC 97973 Query 50550 GAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACGTTGAAAACAAACCCCGAC 50609 |||| || || || || || || |||| || || | || | | ||| || || || Sbjct 97972 CAAGGCCAGGGTGTTGACCAGCTACAAAGTATCATTAAGATGATAAAAGAGAATCCAGAT 97913 Query 50610 GATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAGATCAAACCGTTTTACCT 50669 ||| || | || || | | || ||||| || ||||| ||||| | ||| ||| Sbjct 97912 GATAGGAGGATGATATTATCTGCATGGAACCCTGTTGATATTCCTCAAATGGCTTTGCCT 97853 Query 50670 CCGTGTCATGTTTTATGTCAATTTTATGCCACAGACAATGTT---TTATCCTGTCAATGT 50726 || || ||| || || ||||||| | ||||| || ||||| ||| Sbjct 97852 CCATGCCATTGCTTGGCACAGTTTTATGTTGC---CAATGGAGAATTGTCCTGCCAACTG 97796 Query 50727 TATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTAGCTTCTTACGCTTTA 50786 || |||||||||||||||||||| ||||| ||||| || || | ||| ||| || || Sbjct 97795 TACCAAAGATCAGCTGATATGGGATTAGGTGTTCCCTTTAATATTGCTAGTTATGCATTT 97736 Query 50787 TTAAC 50791 ||||| Sbjct 97735 TTAAC 97731 >seq276 Length=734573 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 155934 CCAGGTCTTAATAATGCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATTAAA 155993 |||||||| | ||| ||||||||||| | || |||||| ||||| || || || ||| Sbjct 582141 CCAGGTCTGAGTAAAGCTTCGTCAATCATATCTCTTCTGTTTGTCATTCCAATAATCAAA 582200 Query 155994 ATGTTGTTTAAAGATTCTACACCGTCTATTTTAGACAATAATTGATTGACTAC 156046 || || ||||| || ||||| ||||||||||||| | ||||||||||| Sbjct 582201 ATATTATTTAACTGATCAACACCATCTATTTTAGACAGAAGCTGATTGACTAC 582253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666973737862080