Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1287 84.2 2e-11 >seq1287 Length=463317 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| || ||| ||| || || || ||||| || || Sbjct 101182 CCACCTCGCAGCCGCAGTACAAGATGAAGAGTGGACTCTTTTTGTATATTATAATCTGAC 101241 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || ||||| || || || ||||| |||| ||||| ||||| | ||| Sbjct 101242 AGGGTTCGGCCATCTTCGAGTTGTTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGA 101301 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | || || || ||| |||| || | ||| | | ||||| | ||| || Sbjct 101302 ATTCCTTCTTTATCT-TGAATTTTAGCCTTAACATTTTCGATGGTGTCTGAAGGCTCAAC 101360 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || ||||||||||| || || ||||| ||||| |||||||| Sbjct 101361 TTCTAATGTAATCGTTTTACCAGTTAGAGTCTTGACGAAGATCTGCAT 101408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462233683561600