Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq8630 105 7e-18 >seq8630 Length=35068 Score = 105 bits (116), Expect = 7e-18 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 16793 AATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGA 16852 |||||||| || |||||||| || || |||||| | | ||| ||||||||||| || Sbjct 15591 AATCTATCTGCGACAAATTCGATGTAGGTGCACATGAGTGTGCAATTCATTCCTATGAGT 15532 Query 16853 CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912 |||||| | || | || | |||| | ||| || | || || ||| ||||||| Sbjct 15531 TTTACCGGCAATGCCTGTGTTAGAAATTCCTTCTCAATTTCTACGGCGTCCATAATAATC 15472 Query 16913 CTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAA 16972 | || ||||| || ||| | ||| | | |||||||||||||| |||||| ||| Sbjct 15471 GTCTTGACGCGTTCAAACGAAGGTTTTTGTATGACATGTTTAAACATCAAACATGCAAAA 15412 Query 16973 TCGCAATGTAATCCCT 16988 |||||||| ||||||| Sbjct 15411 TCGCAATGCAATCCCT 15396 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 17216 TTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATG 17275 ||||| | ||| || || || || |||||||| | ||||||||||| || ||| Sbjct 13763 TTTTCTTTTAGATCAGAGATGTAGGTTTCGATGAGCAATGAATACATTTCGGAATGAATG 13704 Query 17276 TTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACG 17335 ||||| || || || || || || || || || || || || | || | |||||| | Sbjct 13703 TTCTCTATTGCAATTTGGAAGCCATAGAAACAACGCGCCTCTGAAATCTTAACTTCTTGG 13644 Query 17336 TAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAAT 17395 |||||| ||| |||||||| || ||||| ||||| ||||| || |||||||| Sbjct 13643 CAGAATCTTTCAATAAGATTTTCATTGACGATACCGTCAGAAGCGGCAAAGAACGCCAAC 13584 Query 17396 ATATGCTTAATGAAATATTTTTCGTC 17421 | || ||||||||| |||| || Sbjct 13583 ACGTGGGATATGAAATATCTTTCATC 13558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517488068337240