Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq7280 96.9 3e-15 >seq7280 Length=1514598 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 18615 TTTCCTCTTTTAACTACAAAGCGTGTTTTTTGGAGGGCCGTCGTGGAAGAGTTGTTATGG 18674 ||||| | || || || ||| | || ||||||| || || || ||||||||||||||| Sbjct 1012157 TTTCCATTATTGACAACCAAGAGAGTATTTTGGAAAGCAGTGGTTGAAGAGTTGTTATGG 1012216 Query 18675 TTTATCCGCGGGTCAACCGATTCCAAAGAACTCGCCGCTAAAGATATACACATATGGGAT 18734 || ||| || ||||| |||| |||||| | || | ||||| ||||||||| |||||| Sbjct 1012217 TTCATCAAAGGATCAACAAATTCTAAAGAATTAGCAGATAAAGGTATACACATCTGGGAT 1012276 Query 18735 ATATACGGATCGAGCAAATTTCTAAATAGGAATGGCTTCCATAAAAGACACACGGGGGAC 18794 | | | || ||| | ||| | || |||||| | ||| | || || Sbjct 1012277 AAAAATGGTTCGCGTGCTTTTTTGGATTCCTGTGGCTTTAGCGACAGAGAGGAAGGTGAT 1012336 Query 18795 CTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGA 18847 | || || | || || ||||| |||||||||| || || ||||| ||||| Sbjct 1012337 TTAGGACCTGTCTATGGATTCCAATGGAGACATTACGGTGCAGAATACAAAGA 1012389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399460700383185