Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq7280 136 3e-27 >seq7280 Length=1514598 Score = 136 bits (150), Expect = 3e-27 Identities = 172/235 (73%), Gaps = 6/235 (3%) Strand=Plus/Minus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||| |||||||| ||| |||| ||||| || |||||||| |||||||| | ||| |||| Sbjct 1012388 CTTTGTATTCTGCACCGTAATGTCTCCATTGGAATCCATAGACAGGTCCTAAATCACCTT 1012329 Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152 | |||||||| ||| ||| ||| ||||| | | || ||||| |||||| | Sbjct 1012328 CCTCTCTGTCGCTAAAGCCACAGGAATCCAAAAAAGCACGCGAACCATTTTTATCCCAGA 1012269 Query 102153 TGTGCACGCC---AGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACA 102209 |||| | || | ||||| || ||||| | || |||||| |||| ||||| | Sbjct 1012268 TGTGTATACCTTTATCTGCTAAT---TCTTTAGAATTTGTTGATCCTTTGATGAACCATA 1012212 Query 102210 ACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA 102264 ||| |||||||| || || |||||||||||||||| || || || | |||||| Sbjct 1012211 ACAACTCTTCAACCACTGCTTTCCAAAATACTCTCTTGGTTGTCAATAATGGAAA 1012157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361212046353143