Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17]
8,893 sequences; 294,465,601 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq3349 98.7 8e-16
>seq3349
Length=644485
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| ||||| ||| || ||||| ||||| || ||||| | |
Sbjct 96615 CCGCCACGAAGTCGGAGTACCAAATGCAGAGTAGATTCCTTCTGAATATTGTAGTCTGAC 96674
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| ||| | ||||||| |||||||| |||||| | || ||||||||||| || ||
Sbjct 96675 AAAGTTCGTCCGTCCTCGAGCTGTTTACCCGCAAAGATCAGTCTCTGCTGATCAGGTGGA 96734
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||| ||||| || || ||||| | | | || || | ||| |
Sbjct 96735 ATGCCTTCTTTGTCTTGAATTTTCGCCTTCACATTCTCAATGGTGTCTGATGCTTCCACT 96794
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| |||||| || || || || | |||||||| || || |||||
Sbjct 96795 TCCAAGGTAATCGTTTTTCCAGTCAGGGTTTTGACGAAAATCTGCAT 96841
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| ||||| |||| ||||||| ||| | ||||| || || || || |||||||| |
Sbjct 95931 CCACCTCGAAGCCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTATAGTCAGAT 95990
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| || | | || || || ||||| || ||| | || | ||||||||| ||| |||
Sbjct 95991 AACGTGCGACCATCTTCGAGTTGTTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGG 96050
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| ||||| ||| || | | | ||| ||| | ||| |
Sbjct 96051 ATTCCTTCCTTGTCCTGAATCTTCGCTTTGACATTTTCAATAGTGTCAGAAGCCTCGACT 96110
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| || |||||||| || || || || || || || ||||||||
Sbjct 96111 TCCAACGTGATGGTCTTTCCTGTCAAAGTCTTTACGAAGATTTGCAT 96157
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422213434096388
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |