Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq8311 138 1e-27 seq3349 113 5e-20 seq8630 93.3 4e-14 seq2953 93.3 4e-14 seq8719 89.7 5e-13 seq5300 87.8 2e-12 >seq8311 Length=725843 Score = 138 bits (152), Expect = 1e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||||||||| |||||||| || |||||||| | || || ||||| | Sbjct 133702 AATGCAGATTTTCGTAAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTTGAAGCATC 133761 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | || | ||||||| ||||||||||| || || |||| || Sbjct 133762 TGACACAATAGAGAATGTAAAAGCCAAAATTCAGGACAAAGAGGGAATTCCTCCGGATCA 133821 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| | |||| || ||||| ||| |||| || | | || || |||||||| Sbjct 133822 GCAACGTTTGATCTTTGCTGGCAAGCAGTTGGAAGATGGCAGAACTCTATCGGACTACAA 133881 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| ||||||||||| |||| || || Sbjct 133882 CATCCAGAAGGAGTCCACGCTGCATTTAGTCTTACG 133917 Score = 120 bits (132), Expect = 3e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||| |||||||| || || || || ||||| ||||| |||||||| | || |||||||| Sbjct 132787 AAACATGCAAATCTTTGTGAAGACTCTCACAGGCAAGACCATCACTCTTGAGGTCGAAGC 132846 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | ||| | |||| || |||| || |||||||| || || | || Sbjct 132847 TTCTGACACAATAGAAAATGTAAAGGCTAAGATTCAGGATAAAGAGGGAATTCCTCCAGA 132906 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||||| || |||| || ||||| || ||||| |||| | || || ||||| Sbjct 132907 TCAGCAACGTCTGATCTTTGCCGGCAAGCAACTGGAAGACGGCAGAACTCTTTCTGACTA 132966 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 || |||||||||||| |||| || ||||| || |||| Sbjct 132967 TAATATCCAGAAGGAGTCCACACTTCATCTGGTTCTGCG 133005 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||||||||| |||||||| || |||||||| | || || ||||| | Sbjct 133474 AATGCAGATTTTCGTAAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTTGAAGCGTC 133533 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | |||| |||||| | |||||||| || || || | || || Sbjct 133534 TGACACAATAGAGAATGTAAAGGCAAAAATACAAGACAAAGAAGGTATTCCTCCTGATCA 133593 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| || |||| ||| ||||| || || || || | | || || ||||| || Sbjct 133594 GCAACGCCTGATCTTCGCCGGCAAGCAACTAGAAGATGGCAGAACTCTTTCTGACTATAA 133653 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||| ||| |||| || ||||| || |||| Sbjct 133654 CATCCAGAAAGAGTCCACACTTCATCTGGTTCTGCG 133689 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||||| ||| ||| |||| || |||||||| | || || ||||| | Sbjct 133018 AATGCAGATTTTCGTAAGAACCCTCGCGGGTAAGACCATCACTCTTGAGGTTGAAGCATC 133077 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | || | ||||| | ||||||||||| || || |||| || Sbjct 133078 TGACACAATAGAGAATGTAAAAGCTAAAATCCAGGACAAAGAGGGAATTCCTCCGGATCA 133137 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| || |||| ||| || || || | || |||| | || || ||||| || Sbjct 133138 GCAACGTCTGATCTTCGCCGGAAAGCAATTAGAAGACGGCAGAACTCTTTCTGACTATAA 133197 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| |||| || ||||| || |||| Sbjct 133198 TATCCAGAAGGAGTCCACACTTCATCTGGTTCTGCG 133233 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||||| ||| ||| |||| || |||||||| | || || ||||| | Sbjct 133246 AATGCAGATTTTCGTAAGAACCCTCGCGGGTAAGACCATCACTCTTGAGGTTGAAGCATC 133305 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | || | ||||| | || |||||||| || || |||| || Sbjct 133306 TGACACAATAGAGAATGTAAAAGCTAAAATCCAGGATAAAGAGGGAATTCCTCCGGATCA 133365 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| || |||| ||| || || || | || |||| | || || ||||| || Sbjct 133366 ACAACGTCTGATCTTCGCCGGAAAGCAATTAGAAGACGGCAGAACTCTTTCTGACTATAA 133425 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| |||| || ||||| || ||||| Sbjct 133426 CATCCAGAAGGAGTCCACACTTCATCTGGTTTTGCG 133461 >seq3349 Length=644485 Score = 113 bits (124), Expect = 5e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || |||||||| | || || ||||| || Sbjct 95245 ATGCAGATCTTCGTGAAGACTTTAACAGGAAAGACCATCACGTTGGAGGTTGAAGCATCC 95186 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| ||||| | ||||||||||| ||||| | || ||| Sbjct 95185 GACACCATCGAGAATGTTAAGGCGAAAATCCAAGACAAAGAGGGTATCCCTCCCGATCAG 95126 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||| || | |||| ||||| ||||| || || |||| |||||||| || |||||| Sbjct 95125 CAAAGATTAATCTTTGCGGGTAAACAACTAGAAGACGGACGCACCCTGTCTGATTACAAC 95066 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||| || |||| || || || ||| Sbjct 95065 ATCCAGAAAGAATCCACCCTTCACCTGGTG 95036 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || |||||||| | || || ||||| || Sbjct 95473 ATGCAGATCTTCGTGAAGACTTTAACAGGAAAGACCATCACGTTGGAGGTTGAAGCATCC 95414 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| ||||| | ||||||||||| ||||| | || ||| Sbjct 95413 GACACCATCGAGAATGTTAAGGCGAAAATCCAAGACAAAGAGGGTATCCCTCCCGATCAG 95354 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||| || | |||| ||||| ||||| || || |||| |||||||| || |||||| Sbjct 95353 CAAAGATTAATCTTTGCGGGTAAACAACTAGAAGACGGACGCACCCTGTCTGATTACAAC 95294 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||| || |||| || || || || Sbjct 95293 ATCCAGAAAGAATCCACCCTTCACCTGGT 95265 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| | ||||| || |||||||| | || ||||| ||| || Sbjct 96385 ATGCAGATTTTCGTGAAAACTTTGACGGGGAAGACCATCACGTTGGAGGTCGAGGCCTCC 96326 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | | || | || |||| |||||||| || ||||| | || ||| Sbjct 96325 GATACCATCGAGAATGTGAAAGCTAAGATTCAAGACAAAGAAGGAATCCCGCCTGATCAG 96266 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | ||||| | ||||| |||||||| || |||| ||||| || |||||||||| Sbjct 96265 CAGAGGCTCATATTTGCGGGTAAACAGCTCGAGGACGGACGCACTCTGTCCGACTACAAC 96206 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || |||||||| | || || || |||| Sbjct 96205 ATTCAGAAGGAATCTACCCTTCACTTAGT 96177 Score = 109 bits (120), Expect = 6e-19 Identities = 141/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | ||||| |||||||||||| |||| ||||| ||| || Sbjct 97297 ATGCAGATTTTCGTGAAGACATTAACGGGAAAAACCATCACCCTCGAAGTCGAGGCCTCC 97238 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| ||| |||| || || || || ||||| | || || Sbjct 97237 GACACGATCGAGAACG-TGAAGGCAAAGATTCAAGATAAGGAAGGGATCCCACCCGATCA 97179 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || || || || |||| || || | ||| ||||| Sbjct 97178 GCAGCGTCTCATCTTCGCCGGAAAGCAACTCGAGGACGGACGTACTTTGTCCGATTACAA 97119 Query 40869 CATCCAGAAGGA 40880 ||| |||||||| Sbjct 97118 CATTCAGAAGGA 97107 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || |||||||| | || || ||||| || Sbjct 95017 ATGCAGATCTTCGTGAAGACTTTAACAGGAAAGACCATCACGTTGGAGGTTGAAGCATCC 94958 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| ||||| | ||||||||||| ||||| | || ||| Sbjct 94957 GACACCATCGAGAATGTTAAGGCGAAAATCCAAGACAAAGAGGGTATCCCTCCCGATCAG 94898 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||| || | |||| ||||| ||||| || || |||| |||||| | ||| |||||| Sbjct 94897 CAAAGATTAATCTTTGCGGGTAAACAACTAGAAGACGGACGCACCTTGTCCGATTACAAC 94838 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || || || || | ||||| || || || Sbjct 94837 ATTCAAAAAGAATCTACGCTTCACCTTGT 94809 >seq8630 Length=35068 Score = 93.3 bits (102), Expect = 4e-14 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 116742 ATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATC 116801 ||||||| |||||| |||| || || ||||| ||||| |||||||| || |||| Sbjct 13568 ATTTCATATCCCACGTGTTGGCGTTCTTTGCCGCTTCTGACGGTATCGTCAATGAAAATC 13627 Query 116802 TGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTC 116861 | | || | ||| || || || || | | |||||||| || ||||| ||||| | Sbjct 13628 TTATTGAAAGATTCTGCCAAGAAGTTAAGATTTCAGAGGCGCGTTGTTTCTATGGCTTCC 13687 Query 116862 AGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 | || || || |||||| | || || ||||||||||| |||||||| || ||| Sbjct 13688 AAATTGCAATAGAGAACATTCATTCCGAAATGTATTCATTGCTCATCGAAACCTAC 13743 >seq2953 Length=1164165 Score = 93.3 bits (102), Expect = 4e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| |||||||| || || || ||| |||| || ||||| || Sbjct 119872 ATGCAGATTTTCGTGAAAACCCTCACGGGTAAGACAATTACCCTCGAGGTAGAAGCATCC 119931 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | ||| | || | || |||| ||||||||||| || || | || || Sbjct 119932 GATACCATCGAAAATGTGAAAGCTAAGATTCAAGACAAAGAGGGGATTCCACCAGATCAA 119991 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCAC 40853 || ||||| |||| ||| ||||||||| | || || | ||| || Sbjct 119992 CAGCGACTGATCTTCGCCGGCAAACAGTTAGAGGATGGGCGTAC 120035 >seq8719 Length=610 Score = 89.7 bits (98), Expect = 5e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 40717 GGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAAAAA 40776 || || |||||||| | || || ||||| |||||| | | | | | |||| ||| Sbjct 3 GGAAAGACCATCACGTTGGAGGTTGAAGCATCCGACACCATCGAGAATGTTAAGGCGAAA 62 Query 40777 ATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAG 40836 || | ||||||||||| ||||| | || |||||| || | |||| ||||| ||||| Sbjct 63 ATCCAAGACAAAGAGGGTATCCCTCCCGATCAGCAAAGATTAATCTTTGCGGGTAAACAA 122 Query 40837 CTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTA 40896 || || |||| |||||| | ||| |||||||| || || || | ||||| || || Sbjct 123 CTAGAAGACGGACGCACCTTGTCCGATTACAACATTCAAAAAGAATCTACGCTTCACCTT 182 Query 40897 GT 40898 || Sbjct 183 GT 184 >seq5300 Length=1069934 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || |||||||| || || || ||| |||| || |||||| | Sbjct 717746 ATGCAGATTTTTGTGAAGACTCTCACGGGTAAGACTATAACCCTCGAAGTAGAAGCCTCT 717805 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 ||| | | ||| | |||| ||||||| || || || || || || | || ||| Sbjct 717806 GACTCCATTGAAAATGTGAAGGCTAAAATTCAAGATAAGGAAGGAATTCCACCTGATCAG 717865 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 |||||||| || | || |||||||| |||| || | || || || ||||| ||| Sbjct 717866 CAACGACTTATTTTTGCTGGCAAACAATTGGAAGATGGACGTACTCTTTCTGACTATAAC 717925 Query 40870 ATCCAGAA 40877 ||||| || Sbjct 717926 ATCCAAAA 717933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515161926945680