Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq8722 109 6e-19 seq6447 107 2e-18 seq6770 102 9e-17 seq4201 100 3e-16 seq3349 100 3e-16 seq1306 98.7 1e-15 seq2609 96.9 4e-15 seq2671 95.1 1e-14 seq8311 93.3 5e-14 >seq8722 Length=295648 Score = 109 bits (120), Expect = 6e-19 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 220225 TTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCAC 220166 Query 60124 TATACTACCGAGGAT 60138 ||||||||||||||| Sbjct 220165 TATACTACCGAGGAT 220151 >seq6447 Length=1093865 Score = 107 bits (118), Expect = 2e-18 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 787943 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 787884 Query 60126 TACTACCGAGGATT 60139 |||||||||||||| Sbjct 787883 TACTACCGAGGATT 787870 >seq6770 Length=222752 Score = 102 bits (112), Expect = 9e-17 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| ||||||| || | ||||||||||||| ||||||||||||||||||||| |||| Sbjct 217847 AAAAGATTTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 217788 Query 60117 TCACCACTATACTACCGAGGA 60137 | |||||||||||| |||||| Sbjct 217787 TAACCACTATACTATCGAGGA 217767 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 56449 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 56390 Query 60126 TACTACCGAGGATT 60139 ||||| |||||||| Sbjct 56389 TACTATCGAGGATT 56376 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | |||| || | ||||||||||||| ||||||||||||| ||||||| |||| Sbjct 53316 AAAAAAATACTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGCCAGGCGGGGATAC 53375 Query 60117 TCACCACTATACTACCGAGGA 60137 | |||||||||||| |||||| Sbjct 53376 TAACCACTATACTATCGAGGA 53396 >seq4201 Length=319496 Score = 100 bits (110), Expect = 3e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122 || ||||||| | ||||||||||||| ||||||||||||||||||||| ||||| |||| Sbjct 138137 TTCCTCCTCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCA 138078 Query 60123 CTATACTACCGAGGA 60137 |||||||| |||||| Sbjct 138077 CTATACTATCGAGGA 138063 >seq3349 Length=644485 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 || || || ||||||||||||| || ||| || |||| || || ||||| ||||| || Sbjct 96423 TCTTTCTGTATATTGTAATCAGACAAAGTACGTCCGTCTTCAAGTTGCTTTCCAGCAAAG 96482 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 ||||| |||||||| |||| || | | ||||| | | ||| | |||| || | | Sbjct 96483 ATGAGACGCTGCTGATCGGGTGGGATCCCTTCCTTAT-CTTGAATCTTTGCCTTCACGTT 96541 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||| | || || || | ||||||||||| ||||| | ||||| || Sbjct 96542 CTCGATCGTGTCGGAAGCCTCAACTTCCAAAGTGATGGTTTTCCCCGTCAAAGTCTTCAC 96601 Query 43172 AAAGATTTGCAT 43183 ||||||||||| Sbjct 96602 GAAGATTTGCAT 96613 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| ||||| |||||||| | || ||| || |||| || || ||||| || ||||| Sbjct 97107 TCCTTCTGAATGTTGTAATCGGACAAAGTACGTCCGTCCTCGAGTTGCTTTCCGGCGAAG 97166 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT- 43111 ||||| |||||||| |||| || | | ||||| || ||| | |||| | ||| Sbjct 97167 ATGAGACGCTGCTGATCGGGTGGGATCCCTTCCTTATCT-TGAATCTTTGCCTTCACGTT 97225 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||| | || || |||| ||||||||||| ||||||| ||||| || Sbjct 97226 CTCGATCGTGTCGGAGGCCTCGACTTCGAGGGTGATGGTTTTTCCCGTTAATGTCTTCAC 97285 Query 43172 AAAGATTTGCAT 43183 || || ||||| Sbjct 97286 GAAAATCTGCAT 97297 Score = 89.7 bits (98), Expect = 6e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||| ||| | ||| || || || ||||||||||||| ||| ||||| | || || Sbjct 95720 CACCAGATGGAGGGTGGATTCTTTCTGGATATTGTAATCAGACAGGGTCCGTCCATCCTC 95779 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 ||||| ||||| ||||| || |||| ||||||||||| || | | || ||| | | Sbjct 95780 GAGCTGTTTACCCGCGAAGATCAGTCTCTGCTGGTCGGGTGGAATTC-CTTCTTTATCTT 95838 Query 43094 GATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 || | || | |||| || | | |||||| | || || || | ||| || || | Sbjct 95839 GAATCTTCGCCTTGACATTCTCGATGGTGTCGGAAGCCTCGACCTCCAACGTAATCGTCT 95898 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || |||||||| || || || |||||||| Sbjct 95899 TTCCGGTTAGCGTTTTGACGAAAATTTGCAT 95929 >seq1306 Length=384595 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 ||||||| | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 260408 CTCCTCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 260349 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 260348 TACTATCGAGGA 260337 >seq2609 Length=418247 Score = 96.9 bits (106), Expect = 4e-15 Identities = 72/84 (86%), Gaps = 3/84 (4%) Strand=Plus/Plus Query 60057 AAAAATT---TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 ||||||| | |||| || | ||||||||||||| ||||||||||||||||||||| | Sbjct 28185 AAAAATTAAATACTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 28244 Query 60114 TACTCACCACTATACTACCGAGGA 60137 |||| |||||||||||| |||||| Sbjct 28245 TACTAACCACTATACTATCGAGGA 28268 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 28502 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 28561 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 28562 TACTATCGAGGA 28573 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| |||| ||||||| Sbjct 28027 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGGTACTAACCACTA 27968 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 27967 TACTATCGAGGA 27956 >seq2671 Length=793039 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 333246 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 333305 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 333306 TACTATCGAGGA 333317 >seq8311 Length=725843 Score = 93.3 bits (102), Expect = 5e-14 Identities = 162/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||||| | ||||| |||| ||| | |||| |||||| || ||||| || |||| Sbjct 133018 TCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCCTTCTGGATATTATAGTCAGA 132959 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 ||||| | |||| || || ||||| || || || || || || ||||| || | || Sbjct 132958 AAGAGTTCTGCCGTCTTCCAGTTGCTTGCCGGCAAAGATCAGACGTTGCTGATCTGGAGG 132899 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCA 43134 | | ||| || ||| ||| | || | || | | | | ||||| | ||| | Sbjct 132898 AATTCCCTCTTTATCC-TGAATCTTAGCCTTTACATTTTCTATTGTGTCAGAAGCTTCGA 132840 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTT 43187 | || | |||||||| ||||| || || ||||| |||||||||||||| ||| Sbjct 132839 CCTCAAGAGTGATGGTCTTGCCTGTGAGAGTCTTCACAAAGATTTGCATGTTT 132787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571754035326040