Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq8311 102 1e-16 seq4549 96.9 5e-15 seq5300 95.1 2e-14 seq3349 93.3 6e-14 seq7689 86.0 9e-12 >seq8311 Length=725843 Score = 102 bits (112), Expect = 1e-16 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| |||| ||| | | |||| ||| | || || || || |||||||| || | Sbjct 133247 TTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCCTTCTGGATATTATAGTCAG 133188 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||||||||||| || |||||||| ||||| || || |||| | |||||||||||||| Sbjct 133187 AAAGAGTTCTGCCGTCTTCTAATTGCTTTCCGGCGAAGATCAGACGTTGCTGATCCGGAG 133128 Query 146169 GAATTCCTTCTTTATCTTG 146187 ||||||| ||||| || || Sbjct 133127 GAATTCCCTCTTTGTCCTG 133109 Score = 102 bits (112), Expect = 1e-16 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| |||| ||| | || |||| ||| | || || || || || ||||| || | Sbjct 133475 TTCCTCCTCGAAGACGCAAAACCAGATGAAGTGTGGACTCCTTCTGGATGTTATAGTCAG 133416 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||||||||||| || |||||||| ||||| || || |||| | ||| |||||||||| Sbjct 133415 AAAGAGTTCTGCCGTCTTCTAATTGCTTTCCGGCGAAGATCAGACGTTGTTGATCCGGAG 133356 Query 146169 GAATTCCTTCTTTATCTTG 146187 ||||||| |||||||| || Sbjct 133355 GAATTCCCTCTTTATCCTG 133337 Score = 98.7 bits (108), Expect = 1e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| |||| ||| | | |||| ||| | || || ||||| || ||||| || | Sbjct 133703 TTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCTTTCTGGATGTTATAGTCAG 133644 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||||||||||| ||| |||| ||| || || || || |||| | ||||||||| |||| Sbjct 133643 AAAGAGTTCTGCCATCTTCTAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGATCAGGAG 133584 Query 146169 GAATTCCTTCTTTATCTTG 146187 |||| |||||||| ||||| Sbjct 133583 GAATACCTTCTTTGTCTTG 133565 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || || | ||||| ||| || ||||| | || || || || || || || || || Sbjct 133929 CCTCCGCGAAGTCGTAAGACTAAATGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAT 133870 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||||| ||| || || || || |||||||| ||||| | |||||||||||||||| Sbjct 133869 AGAGTTCTGCCATCTTCCAACTGCTTGCCAGCAAAGATCAAACGTTGCTGATCCGGAGGA 133810 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||| ||||| || || Sbjct 133809 ATTCCCTCTTTGTCCTG 133793 Score = 93.3 bits (102), Expect = 6e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| |||| ||| | | |||| ||| | || || || || |||||||| || | Sbjct 133019 TTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCCTTCTGGATATTATAGTCAG 132960 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||||||||||| || || | ||| || || ||||| |||| | ||||||||| |||| Sbjct 132959 AAAGAGTTCTGCCGTCTTCCAGTTGCTTGCCGGCAAAGATCAGACGTTGCTGATCTGGAG 132900 Query 146169 GAATTCCTTCTTTATCTTG 146187 ||||||| |||||||| || Sbjct 132899 GAATTCCCTCTTTATCCTG 132881 >seq4549 Length=1308415 Score = 96.9 bits (106), Expect = 5e-15 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125 || || |||||||||||||| ||||| || ||||| || || | |||||| | ||| Sbjct 663290 AACACTAAATGTAAAGTAGACTCTTTTTGAATGTTATAGTCAGATAAAGTTCTCCCATCT 663349 Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCT 146176 || | |||||||||||| || |||| |||||| ||||| || ||||||||| Sbjct 663350 TCCAGTTGTTTTCCAGCGAAGATCAGTCTTTGTTGATCTGGTGGAATTCCT 663400 >seq5300 Length=1069934 Score = 95.1 bits (104), Expect = 2e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155 || ||||| || |||||||| | | ||| || |||||||| ||||||||||| | || | Sbjct 717927 ATGTTATAGTCAGAAAGAGTACGTCCATCTTCCAATTGTTTGCCAGCAAAAATAAGTCGT 717868 Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 |||||||| || ||||||||||| |||||||| Sbjct 717867 TGCTGATCAGGTGGAATTCCTTCCTTATCTTG 717836 >seq3349 Length=644485 Score = 93.3 bits (102), Expect = 6e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 146069 ACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCT 146128 |||||||| | ||| |||||||| || ||||| || || | || | | ||| || Sbjct 96861 ACCAAATGCAGAGTCGATTCTTTTTGGATGTTATAGTCGGATAACGTGCGACCATCTTCA 96920 Query 146129 AATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 | ||||||||||||||| |||||||| || |||||||| || |||||||| ||||| || Sbjct 96921 AGTTGTTTTCCAGCAAAGATCAATCTCTGTTGATCCGGGGGGATTCCTTCCTTATCCTG 96979 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||||| ||||| | ||||| || | || |||||||| || || ||||| || Sbjct 95247 CCACCTCGAAGTCGAAGTACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGAC 95306 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | | || |||| |||||| || ||||| || |||||||||||||| ||||| Sbjct 95307 AGGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGGG 95366 Query 146171 ATTCCTTCTTTATCTTG 146187 || || ||||| ||||| Sbjct 95367 ATACCCTCTTTGTCTTG 95383 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||||| ||||| | |||| ||| | || |||||||| ||||| ||||| || Sbjct 95475 CCACCTCGAAGTCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTGTAATCAGAC 95534 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | | ||| || | ||||| || ||||| |||| || |||||||| || ||| Sbjct 95535 AGGGTCCGTCCATCCTCGAGCTGTTTACCCGCAAAGATCAGCCTCTGCTGATCGGGTGGA 95594 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||||||||| ||||| Sbjct 95595 ATTCCTTCTTTGTCTTG 95611 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||||| ||| | | |||| ||| | || |||||||| |||||||| || || Sbjct 95931 CCACCTCGAAGCCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTATAGTCAGAT 95990 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | || | | ||| || | ||||||||| ||||| |||||||| ||||||||||| || Sbjct 95991 AACGTGCGACCATCTTCGAGTTGTTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGG 96050 Query 146171 ATTCCTTCTTTATCTTG 146187 |||||||| || || || Sbjct 96051 ATTCCTTCCTTGTCCTG 96067 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||||| ||||| | |||| || | || |||||||| || || ||||| || Sbjct 95019 CCACCTCGAAGTCGAAGCACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGAC 95078 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | | || |||| |||||| || ||||| || |||||||||||||| ||||| Sbjct 95079 AGGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGGG 95138 Query 146171 ATTCCTTCTTTATCTTG 146187 || || ||||| ||||| Sbjct 95139 ATACCCTCTTTGTCTTG 95155 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||||| ||| | | |||| ||| | || |||||||| ||||| ||||| || Sbjct 95703 CCACCTCGAAGCCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTGTAATCAGAC 95762 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | | ||| || | ||||| || || || |||| ||| ||||| || || ||| Sbjct 95763 AGGGTCCGTCCATCCTCGAGCTGTTTACCCGCGAAGATCAGTCTCTGCTGGTCGGGTGGA 95822 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||||||||||||||| Sbjct 95823 ATTCCTTCTTTATCTTG 95839 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||||| ||| | | |||||| || | ||||||||||| |||||| ||||| || Sbjct 96387 CCACCTCGAAGCCGAAGTACCAAGTGAAGGGTAGATTCTTTCTGTATATTGTAATCAGAC 96446 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||| | | || || | ||| ||||||||||| || | | |||||||| || || Sbjct 96447 AAAGTACGTCCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGCTGATCGGGTGGG 96506 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| |||||||| Sbjct 96507 ATCCCTTCCTTATCTTG 96523 >seq7689 Length=276120 Score = 86.0 bits (94), Expect = 9e-12 Identities = 131/185 (71%), Gaps = 4/185 (2%) Strand=Plus/Minus Query 24030 ATAATCACATTTATCAAACCATCTTGCGTGTTGTATCCAAGGATCATCGTCTGTTTCCCA 24089 |||| ||||||| |||||| | || |||||| |||||||||||| |||| ||||| Sbjct 257145 ATAACAACATTTAGAAAACCACTTAGCATGTTGTTCCCAAGGATCATCTTCTGGCTCCCA 257086 Query 24090 TTTATTTAAACCACCATCACAATAAAAGCATTTAAC--TTTATCACTTTTTCCAGTATAA 24147 | ||||| || || ||||||| |||| ||| || ||||| ||||| || ||| Sbjct 257085 ATCTTTTAATCCTCCTCCACAATAGTAGCA--CAACGTTTGATCACCATTTCCTGTGTAA 257028 Query 24148 AAGAATCCAGCTTCTGCTAGTTTTTCTGTAGAAATAGGCATTGAAATAGGCCACTCTTTA 24207 | || ||||| | |||| || ||| | | || ||||| ||||||||| || | Sbjct 257027 TAAAAACCAGCAGCAGCTAATTGTTCCTTGGTTTGTGGGATTGATATAGGCCACATTTCA 256968 Query 24208 TATGT 24212 |||| Sbjct 256967 AATGT 256963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743443747746560