Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq7280 93.3 6e-14 >seq7280 Length=1514598 Score = 93.3 bits (102), Expect = 6e-14 Identities = 126/171 (74%), Gaps = 6/171 (4%) Strand=Plus/Plus Query 70248 AAATGGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTACG--ATGGCAAATT 70305 |||||||| | ||||| |||||| ||| ||||||||| ||| | |||| || | Sbjct 1012656 AAATGGCATTGCCACCATGTCACAATTTTATTCAGTTTTAT--GTAAGCAATGGAGAACT 1012713 Query 70306 GTCATGCTTAA-TGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTG 70364 ||| ||| | | |||||||||||||| || |||||| | || ||||| |||||||| | Sbjct 1012714 GTC-TGCGCAGCTTTATCAGAGGAGTGCAGATATGGGCTTAGGAGTACCGTTTAACATAG 1012772 Query 70365 CAAGCTATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAAAG 70415 || |||||| |||| | |||| || ||||| |||| ||| | |||| Sbjct 1012773 CATCATATTCTTTGTTAATTTACATAATCGCTCATGTTACTGGCTTAAAAG 1012823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740976822006680