Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq8311 132 3e-26 seq5300 96.9 3e-15 seq3349 93.3 3e-14 >seq8311 Length=725843 Score = 132 bits (146), Expect = 3e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 15148 TCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGC 15207 || ||| |||||||| || ||||| || || || |||||||| || |||| |||| | Sbjct 133918 TCGTAAGACTAAATGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGATAGAGTTCTGCC 133859 Query 15208 GTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTT 15267 ||||| || || |||||||| | ||||||||||| || || |||||||| ||||| Sbjct 133858 ATCTTCCAACTGCTTGCCAGCAAAGATCAAACGTTGCTGATCCGGAGGAATTCCCTCTTT 133799 Query 15268 GTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAAT 15327 ||| ||||||| |||||| | ||||| || || ||| || || | || || Sbjct 133798 GTCCTGAATTTTGGCTTTTACATTCTCTATTGTGTCAGATGCTTCAACCTCAAGAGTGAT 133739 Query 15328 GGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||| ||||| || || |||||||| ||||| ||||| Sbjct 133738 GGTCTTACCCGTGAGGGTTTTTACGAAAATCTGCAT 133703 Score = 113 bits (124), Expect = 3e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| | |||||| ||||| ||||| || ||||| || || ||| |||| | ||||| Sbjct 133684 AACCAGATGAAGTGTGGACTCTTTCTGGATGTTATAGTCAGAAAGAGTTCTGCCATCTTC 133625 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 || ||| ||||| ||| | |||| ||||| || || ||||| ||||||||||| Sbjct 133624 TAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGATCAGGAGGAATACCTTCTTTGTCTTG 133565 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||||| ||||||| | ||||| || || ||| || || | || ||||| || Sbjct 133564 TATTTTTGCCTTTACATTCTCTATTGTGTCAGACGCTTCAACCTCAAGAGTGATGGTCTT 133505 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||| || || |||||||| ||||| ||||| Sbjct 133504 ACCCGTGAGGGTTTTTACGAAAATCTGCAT 133475 Score = 111 bits (122), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 ||||| | |||||| ||||| || || || ||||| || || ||| |||| ||||| Sbjct 133458 AAAACCAGATGAAGTGTGGACTCCTTCTGGATGTTATAGTCAGAAAGAGTTCTGCCGTCT 133399 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 |||||||| || || ||| | |||| ||||||||| || |||||||| ||||| || Sbjct 133398 TCTAATTGCTTTCCGGCGAAGATCAGACGTTGTTGATCCGGAGGAATTCCCTCTTTATCC 133339 Query 15272 CAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330 ||||| ||| |||||| | ||||| || || ||| || || | || ||||| Sbjct 133338 TGGATTTTAGCT-TTTACATTCTCTATTGTGTCAGATGCTTCAACCTCAAGAGTGATGGT 133280 Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||||| | || ||| |||| ||||| ||||| Sbjct 133279 CTTACCCGCGAGGGTTCTTACGAAAATCTGCAT 133247 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| | |||||| ||||| || || || || || || || ||| |||| ||||||| Sbjct 133228 AACCAGATGAAGTGTGGACTCCTTCTGGATATTATAGTCAGAAAGAGTTCTGCCGTCTTC 133169 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 |||||| || || ||| | |||| |||||| || || |||||||| |||||||| Sbjct 133168 TAATTGCTTTCCGGCGAAGATCAGACGTTGCTGATCCGGAGGAATTCCCTCTTTGTCCTG 133109 Query 15274 AATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTT 15332 ||||| ||| |||||| | ||||| || || ||| || || | || ||||| | Sbjct 133108 GATTTTAGCT-TTTACATTCTCTATTGTGTCAGATGCTTCAACCTCAAGAGTGATGGTCT 133050 Query 15333 TACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 |||| | || ||| |||| ||||| ||||| Sbjct 133049 TACCCGCGAGGGTTCTTACGAAAATCTGCAT 133019 >seq5300 Length=1069934 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 15174 CTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATA 15233 ||||||| ||||| || || ||| | | | ||||| |||||||||||||| | | Sbjct 717935 CTTTTTGGATGTTATAGTCAGAAAGAGTACGTCCATCTTCCAATTGTTTGCCAGCAAAAA 717876 Query 15234 TCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTT 15293 | | ||||| || || |||||||||||| || || |||||| ||| ||| ||| Sbjct 717875 TAAGTCGTTGCTGATCAGGTGGAATTCCTTCCTTATCTTGAATTTTAGCCTTCACATTTT 717816 Query 15294 CTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAA 15353 | |||| || |||||| || | ||| || || ||||| || ||||| || |||| Sbjct 717815 CAATGGAGTCAGAGGCTTCTACTTCGAGGGTTATAGTCTTACCCGTGAGAGTCTTCACAA 717756 Query 15354 AAATTTGCATA 15364 |||| |||||| Sbjct 717755 AAATCTGCATA 717745 >seq3349 Length=644485 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||||||||| ||||| || ||||||||||| || | | ||||||||| |||| Sbjct 95043 TGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGACAGGGTGCGTCCGTCTTCTAGTTGT 95102 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || || || | || || | ||| || ||| || || || |||||||| ||||| Sbjct 95103 TTACCCGCAAAGATTAATCTTTGCTGATCGGGAGGGATACCCTCTTTGTCTTGGATTTTC 95162 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| ||| | || ||||| ||| ||| || || || || ||||| || ||||| Sbjct 95163 GCCTTAACATTCTCGATGGTGTCGGATGCTTCAACCTCCAACGTGATGGTCTTTCCTGTT 95222 Query 15341 AGAGTTTTTACAAAAATTTGCATA 15364 | ||| || || || || |||||| Sbjct 95223 AAAGTCTTCACGAAGATCTGCATA 95246 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||||||||| ||||| || ||||||||||| || | | ||||||||| |||| Sbjct 95271 TGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGACAGGGTGCGTCCGTCTTCTAGTTGT 95330 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || || || | || || | ||| || ||| || || || |||||||| ||||| Sbjct 95331 TTACCCGCAAAGATTAATCTTTGCTGATCGGGAGGGATACCCTCTTTGTCTTGGATTTTC 95390 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| ||| | || ||||| ||| ||| || || || || ||||| || ||||| Sbjct 95391 GCCTTAACATTCTCGATGGTGTCGGATGCTTCAACCTCCAACGTGATGGTCTTTCCTGTT 95450 Query 15341 AGAGTTTTTACAAAAATTTGCATA 15364 | ||| || || || || |||||| Sbjct 95451 AAAGTCTTCACGAAGATCTGCATA 95474 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| |||||||| ||||| || || |||||||| || | | | || || | || Sbjct 95726 ATGGAGGGTGGATTCTTTCTGGATATTGTAATCAGACAGGGTCCGTCCATCCTCGAGCTG 95785 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||| || ||| | |||| | || |||||| ||||||||||||||| || ||| || Sbjct 95786 TTTACCCGCGAAGATCAGTCTCTGCTGGTCGGGTGGAATTCCTTCTTTATCTTGAATCTT 95845 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 ||| ||| | || ||||| ||| | || || || || ||||| || || || || Sbjct 95846 CGCCTTGACATTCTCGATGGTGTCGGAAGCCTCGACCTCCAACGTAATCGTCTTTCCGGT 95905 Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363 || ||||| || ||||||||||| Sbjct 95906 TAGCGTTTTGACGAAAATTTGCAT 95929 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||||||||| | | | || | ||||| || || |||||||| |||||||||||| Sbjct 94789 TGCCACCTCTGAGACGAAGTACAAGGTGAAGCGTAGATTCTTTTTGAATGTTGTAATCGG 94848 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 | | | ||||||||| |||||| || || | || || | ||| || ||| | Sbjct 94849 ACAAGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAG 94908 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 | || || |||||||| ||||| ||| ||| | || ||||| ||| ||| | Sbjct 94909 GGATACCCTCTTTGTCTTGGATTTTCGCCTTAACATTCTCGATGGTGTCGGATGCTTCAA 94968 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 | || || || ||||| || ||||| | ||| || || || || |||||| Sbjct 94969 CCTCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCATA 95018 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||| | || | || | ||| |||||||| ||||| || || |||||||| Sbjct 95475 CCACCTCGAAGTCGAAGCACCAGATGGAGGGTGGATTCTTTCTGGATATTGTAATCAGAC 95534 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || | | | || || | ||||| || || | |||| | || || ||| |||| Sbjct 95535 AGGGTCCGTCCATCCTCGAGCTGTTTACCCGCAAAGATCAGCCTCTGCTGATCGGGTGGA 95594 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 |||||||||||||| ||| || ||| ||| | || ||||| ||| | || || Sbjct 95595 ATTCCTTCTTTGTCTTGAATCTTCGCCTTGACATTCTCGATGGTGTCGGAAGCCTCGACC 95654 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || ||||| || || || || || ||||| || ||||||||||| Sbjct 95655 TCCAACGTAATCGTCTTTCCGGTTAGCGTTTTGACGAAAATTTGCAT 95701 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||| | || | ||||| |||||||| || || || || |||||||| ||| Sbjct 96159 CCACCTCGAAGTCGAAGTACTAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGAC 96218 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | | |||| || | ||||| || || |||| | | || || || || Sbjct 96219 AGAGTGCGTCCGTCCTCGAGCTGTTTACCCGCAAATATGAGCCTCTGCTGATCAGGCGGG 96278 Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||||||||| ||| || ||| || ||| | || ||||||||| || || Sbjct 96279 ATTCCTTCTTTGTCTTGAATCTTAGCT-TTCACATTCTCGATGGTATCGGAGGCCTCGAC 96337 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || ||||| || || |||| |||||| || ||||| ||||| Sbjct 96338 CTCCAACGTGATGGTCTTCCCCGTCAAAGTTTTCACGAAAATCTGCAT 96385 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || ||||| || || || || || || || ||||| || | | ||| |||| || Sbjct 96633 ACCAAATGCAGAGTAGATTCCTTCTGAATATTGTAGTCTGACAAAGTTCGTCCGTCCTCG 96692 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | ||||| || || | |||| | || || || |||||| ||||||||||| | Sbjct 96693 AGCTGTTTACCCGCAAAGATCAGTCTCTGCTGATCAGGTGGAATGCCTTCTTTGTCTTGA 96752 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 ||||| ||| ||| | || ||||| || ||| || || |||||||| ||||| Sbjct 96753 ATTTTCGCCTTCACATTCTCAATGGTGTCTGATGCTTCCACTTCCAAGGTAATCGTTTTT 96812 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || ||||| ||||| || ||||| |||||| Sbjct 96813 CCAGTCAGGGTTTTGACGAAAATCTGCATA 96842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362139945773313