Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq3349 93.3 3e-14 >seq3349 Length=644485 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972 |||||||| || || |||||||| || ||||| ||| ||| || |||| || Sbjct 96861 ACCAAATGCAGAGTCGATTCTTTTTGGATGTTATAGTCGGATAACGTGCGACCATCTTCA 96920 Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032 | ||||||||| ||||| ||||| | || || ||| | || | ||||| ||||| | Sbjct 96921 AGTTGTTTTCCAGCAAAGATCAATCTCTGTTGATCCGGGGGGATTCCTTCCTTATCCTGA 96980 Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092 || || ||||| | ||| ||| || | | ||| || || | ||| || || || Sbjct 96981 ATCTTCGCCTTGACATTTTCAATAGTGTCGGAAGCCTCAACCTCCAACGTGATGGTCTTC 97040 Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || |||||||||||||| || || ||||| Sbjct 97041 CCCGTTAAAGTCTTCACGAAGATCTGCAT 97069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354739147984164