Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq8630 82.4 7e-11 >seq8630 Length=35068 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/201 (70%), Gaps = 8/201 (4%) Strand=Plus/Minus Query 12977 AACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATT 13036 |||||||| || || ||||| || ||||| ||| | || ||||||||||| Sbjct 15594 AACAATCTATCTGCGACAAATTCGATGTAGGTGCACATGAGTGTGCAATTCATTCCTATG 15535 Query 13037 AATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACT 13096 | |||||| |||| || | ||||| ||| | || || || || || || || |||| Sbjct 15534 AGTTTTACCGGCAATGCCTGTGTTAGAAATTCCTTCTCAATTTCTACGGCGTCCATAATA 15475 Query 13097 AT-GTCTCTTATTACGTTCTCTAATGGAGGATTTGATAG---ATGCTTAAACATCATACA 13152 || |||| | ||| || || | ||| ||| || ||| |||||||||| ||| Sbjct 15474 ATCGTCT----TGACGCGTTCAAACGAAGGTTTTTGTATGACATGTTTAAACATCAAACA 15419 Query 13153 TGCAAAATCACAGTGCAATCC 13173 ||||||||| || |||||||| Sbjct 15418 TGCAAAATCGCAATGCAATCC 15398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430935688645986