Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq6853 107 2e-18 >seq6853 Length=1316947 Score = 107 bits (118), Expect = 2e-18 Identities = 148/203 (73%), Gaps = 8/203 (4%) Strand=Plus/Plus Query 164503 GGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTA 164562 ||||| || || ||||||| ||||| || |||| ||||||||| || ||||||||| Sbjct 1036304 GGCTGCAAGCACGTAAAAGGCATTTTGCTATATGGTCCTCCTGGTACAGGCAAAACATTA 1036363 Query 164563 ATGGCTCGATGCAT-TGCTCAAGCTTTTAAA---TCGCGACCCGTTAAAATTGTTAATGG 164618 |||||||| || | ||| | ||||| ||| || ||| |||||||| || || Sbjct 1036364 ATGGCTCGTCAGATAGGAACAA--TGTTAAACGCTCGAGAACCG--AAAATTGTAAACGG 1036419 Query 164619 TCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCA 164678 || || | ||| ||||||| || || ||| ||||||||| |||||| |||||| Sbjct 1036420 CCCACAAATTTTGGACAAATACGTTGGAGAGAGTGAAGCTAATATTAGAAGATTGTTTGC 1036479 Query 164679 GGAGGCTGAAGAAGAACAAAAGA 164701 || || ||||| ||| |||||| Sbjct 1036480 TGACGCGGAAGAGGAAGAAAAGA 1036502 Score = 86.0 bits (94), Expect = 7e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 164794 GTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATT 164853 ||||| |||||| |||| | || || || ||||| ||| |||||||||||| | ||| Sbjct 1036715 GTGGTGAATCAGCTGCTCGCCAAGATTGACGGTGTTGAACAGTTAAATAATATTCTTATT 1036774 Query 164854 GTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTA 164913 | |||||||||||| || || | || ||||| || ||||| |||||||| |||| Sbjct 1036775 ATTGGTATGACCAACAGAAGAGACATGATCGATGAAGCCTTATTGAGACCTGGTAGATTG 1036834 Query 164914 GA 164915 || Sbjct 1036835 GA 1036836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595805761378800