Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq8484 224 5e-54 >seq8484 Length=86022 Score = 224 bits (248), Expect = 5e-54 Identities = 420/602 (70%), Gaps = 30/602 (5%) Strand=Plus/Minus Query 3551 GCTGTAAAAATGGCAAACATTGATCATGCAACGAATTTCGTATTTACAC-GATTGAAT-G 3608 ||||| || ||||| ||||| || | || ||||| ||| | ||| ||| || | | Sbjct 64427 GCTGTTAAGATGGCGAACATAAATAAAGCGTGCAATTT--TATGTTCACTGATGGAGTAG 64370 Query 3609 ATGGATCAA--ATGAATTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAG 3666 || || || | || || |||| ||||| || ||||||||||| || |||||||| || Sbjct 64369 AT--ATGAAGGACGAGCTGTTATACTTTGCAGATGTATGCGCTGGCCCTGGTGGTTTTAG 64312 Query 3667 TGAATATATGTTATGGAGAAAGAAATGGAATATCAAAGGTTATGGTATGACGTTACGC-G 3725 |||||||| || | |||||||| ||| || ||||| | ||| || |||| | | Sbjct 64311 CGAATATATTTTGTCAAGAAAGAAGTGGCATGCTAAAGGATTTGG-AT----TTACTCTG 64257 Query 3726 aaaaa----aaTGATTTTCAACTGAACAGATTTTACGATA-ACTTTTCGGAAACTTTACA 3780 ||||| ||||| ||| || | || |||| || || | || | ||||| || Sbjct 64256 AAAAATGAAAATGACTTTAAATTAGACGAGTTTTTCGCCGGACCATGCG-AGACTTTCCA 64198 Query 3781 CCCGTATTATGGTCCGCTTAACGAT---GGTAATATCTACAATTCACAAAATCAGAAAGG 3837 || | |||||| | ||| ||| ||| || | || || || | ||||||| || Sbjct 64197 TCCATTTTATGGATC---TAAAGATAATGGTGATGTGTATGATCCAAAGAATCAGATAGA 64141 Query 3838 TTTTTGTGAAATGATTATGAAAGATACCGAAGGAAAAGGTGTACATTTTATGATGGCTGA 3897 || | || | || |||||| | || | |||||||| ||||||||||||||| | || Sbjct 64140 GTTCAGAGACTTAATCATGAAACACACATATGGAAAAGGAGTACATTTTATGATGTCAGA 64081 Query 3898 CGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTA 3957 || || ||||| || || || |||||||||| || || || ||||| || | | || Sbjct 64080 TGGAGGTTTCTCTGTGGAAGGCAAAGAAAATATACAGGAGATTTTATCAAAGCGGCTCTA 64021 Query 3958 TTTGTGTCAATGTTTAATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAA 4017 | | || |||||||| || ||| | ||||| | ||| ||||| |||| ||| | || Sbjct 64020 TCTATGCCAATGTTTGATAGCACTCATGATAGTGAGAACAGGTGGACATTTTGTAACAAA 63961 Query 4018 ATTTTTCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTT 4077 || |||||| | || || || ||||||| ||| |||| || |||||||| |||| ||| Sbjct 63960 GTTATTCGATCTGTTCACGCCGTTTAGTGTTGGACTAGTTTACTTGATGTACAGATGTTT 63901 Query 4078 TAATCGTATTTGTATTTTCAAACC--ACATTCATCGCGACCGGCCAATTCTGAAAGATAT 4135 | || | ||||||||||| || ||| | || |||| || ||||||||| | ||| Sbjct 63900 CGACAGTGTCTGTATTTTCAAGCCCAACAGT--TCTAGACCAGCTAATTCTGAACGCTAT 63843 Query 4136 TT 4137 || Sbjct 63842 TT 63841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276523626170179