Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq6830 125 4e-24 seq6770 125 4e-24 seq2252 125 4e-24 seq3203 118 6e-22 seq7452 116 2e-21 >seq6830 Length=1218803 Score = 125 bits (138), Expect = 4e-24 Identities = 83/93 (89%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 || ||| |||||| ||| |||||||||| |||||||||| ||||||||||||||||| Sbjct 770149 AAATAAAAAAAAAAAAAACTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTA 770090 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||| |||||||||||||||||||| Sbjct 770089 GCACGACGCTCTAACCAACTGAGCTAATGGGCC 770057 >seq6770 Length=222752 Score = 125 bits (138), Expect = 4e-24 Identities = 80/88 (91%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| ||| |||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 80261 AAAAAAAGAAACTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 80320 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCGT 11531 ||||| |||||||||||||||||||||| Sbjct 80321 GCTCTAACCAACTGAGCTAATGGGCCGT 80348 Score = 120 bits (132), Expect = 2e-22 Identities = 73/78 (94%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||| || Sbjct 79915 AAATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 79974 Query 11512 CAACTGAGCTAATGGGCC 11529 |||||||||||||||||| Sbjct 79975 CAACTGAGCTAATGGGCC 79992 Score = 118 bits (130), Expect = 6e-22 Identities = 81/91 (89%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||||| ||| ||||||||| |||||||||| ||||||||||||||||||||| Sbjct 79335 AAGAAAAAA--AAACTGGCCCATGGGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 79392 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 |||||||| |||||||||||||||||||||| Sbjct 79393 GACGCTCTAACCAACTGAGCTAATGGGCCGT 79423 >seq2252 Length=285692 Score = 125 bits (138), Expect = 4e-24 Identities = 84/94 (89%), Gaps = 3/94 (3%) Strand=Plus/Minus Query 11439 TTAATAAAAAATCAAA---TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATT 11495 ||||||||| || ||| ||||||||||| |||||||||| |||||||||||||||| Sbjct 70294 TTAATAAAAGATAAAAAACTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATT 70235 Query 11496 AGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||| |||||||||||||||||||| Sbjct 70234 AGCACGACGCTCTAACCAACTGAGCTAATGGGCC 70201 >seq3203 Length=703765 Score = 118 bits (130), Expect = 6e-22 Identities = 79/89 (89%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||||| | | |||||||||| |||||||||| ||||||||||||||||||||| Sbjct 92419 AAGAAAAAAAAACACTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 92360 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 92359 GACGCTCTAACCAACTGAGCTAATGGGCC 92331 >seq7452 Length=306085 Score = 116 bits (128), Expect = 2e-21 Identities = 78/88 (89%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||||| | | |||||||||| |||||||||| ||||||||||| ||||||||||| Sbjct 281190 TAAAAAAAAAGACTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGCTATTAGCACGA 281131 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||| ||||||||||||||||||||| Sbjct 281130 CGCTCTAACCAACTGAGCTAATGGGCCG 281103 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261462858684868