Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq3349 125 6e-24 seq8311 114 1e-20 seq8719 100 3e-16 >seq3349 Length=644485 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 |||||||| ||||| | ||| |||||| || ||| || || || ||||| || Sbjct 94821 GTAGATTCTTTTTGAATGTTGTAATCGGACAAGGTGCGTCCGTCTTCTAGTTGTTTACCC 94880 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 |||||||||||||||||||||| ||||| ||||| |||||||| | ||||| ||||| Sbjct 94881 GCAAAGATTAATCTTTGCTGATCGGGAGGGATACCCTCTTTGTCTTGGATTTTCGCCTTA 94940 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || ||| ||||| | || || || | ||||||||| ||||| || | ||| Sbjct 94941 ACATTCTCGATGGTGTCGGATGCTTCAACCTCCAACGTGATGGTCTTTCCTGTTAAAGTC 95000 Query 94991 TTCACAAAGATCTGCAT 95007 ||||| ||||||||||| Sbjct 95001 TTCACGAAGATCTGCAT 95017 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||| | ||| | ||||| ||| | || ||||| || || | ||| ||||| | Sbjct 95019 CCACCTCGAAGTCGAAGCACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGAC 95078 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| || || || ||||| || |||||||||||||||||||||| ||||| Sbjct 95079 AGGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGGG 95138 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||| |||||||| | ||||| ||||| || ||| ||||| | || || Sbjct 95139 ATACCCTCTTTGTCTTGGATTTTCGCCTTAACATTCTCGATGGTGTCGGATGCTTCAACC 95198 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | ||||||||| ||||| || | ||| ||||| ||||||||||| Sbjct 95199 TCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95245 Score = 122 bits (134), Expect = 8e-23 Identities = 166/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||| | ||| | ||||||||| | ||||||||||| || | ||| |||||| | Sbjct 97071 CCACCTCGAAGTCGAAGCACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCGGAC 97130 Query 94841 ATAGT--GTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | ||| || | ||||| || || |||||| | ||||| | | |||||||| || | Sbjct 97131 AAAGTACGTCCG--TCCTCGAGTTGCTTTCCGGCGAAGATGAGACGCTGCTGATCGGGTG 97188 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 | || ||||| || || | ||| |||||||| ||| ||| ||||| | | |||| Sbjct 97189 GGATCCCTTCCTTATCTTGAATCTTTGCCTTCACGTTCTCGATCGTGTCGGAGGCCTCGA 97248 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 | || | |||||||||||||| || | || ||||| || ||||||||| Sbjct 97249 CTTCGAGGGTGATGGTTTTTCCCGTTAATGTCTTCACGAAAATCTGCATG 97298 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||| | ||| | |||| ||| | || ||||| || || | ||| ||||| | Sbjct 95247 CCACCTCGAAGTCGAAGTACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGAC 95306 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| || || || ||||| || |||||||||||||||||||||| ||||| Sbjct 95307 AGGGTGCGTCCGTCTTCTAGTTGTTTACCCGCAAAGATTAATCTTTGCTGATCGGGAGGG 95366 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||| |||||||| | ||||| ||||| || ||| ||||| | || || Sbjct 95367 ATACCCTCTTTGTCTTGGATTTTCGCCTTAACATTCTCGATGGTGTCGGATGCTTCAACC 95426 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | ||||||||| ||||| || | ||| ||||| ||||||||||| Sbjct 95427 TCCAACGTGATGGTCTTTCCTGTTAAAGTCTTCACGAAGATCTGCAT 95473 Score = 114 bits (126), Expect = 1e-20 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGGAATCCT 94856 ||||| |||| |||||||||||| || | || || || || ||| || | |||| Sbjct 96633 ACCAAATGCAGAGTAGATTCCTTCTGAATATTGTAGTCTGACAAAGTTCGTCCG--TCCT 96690 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | |||||||| || ||||||| | ||| |||||||| || ||||| ||||||||||| | Sbjct 96691 CGAGCTGTTTACCCGCAAAGATCAGTCTCTGCTGATCAGGTGGAATGCCTTCTTTGTCTT 96750 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 |||||| ||||| || | | ||||| | || || || | || || |||| Sbjct 96751 GAATTTTCGCCTTCACATTCTCAATGGTGTCTGATGCTTCCACTTCCAAGGTAATCGTTT 96810 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||| || ||||| || || |||||||| Sbjct 96811 TTCCAGTCAGGGTTTTGACGAAAATCTGCAT 96841 Score = 114 bits (126), Expect = 1e-20 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 ||||| |||| ||| ||||| ||||| | |||||| ||| ||| || || ||| | Sbjct 96861 ACCAAATGCAGAGTCGATTCTTTTTGGATGTTATAGTCGG--ATAACGTGCGACCATCTT 96918 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | || |||||||| ||||||| ||||| || ||||| || || || ||||| || || | Sbjct 96919 CAAGTTGTTTTCCAGCAAAGATCAATCTCTGTTGATCCGGGGGGATTCCTTCCTTATCCT 96978 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 ||| || |||||||| | | |||||| | || || || | ||||||||| | Sbjct 96979 GAATCTTCGCCTTGACATTTTCAATAGTGTCGGAAGCCTCAACCTCCAACGTGATGGTCT 97038 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || | ||| ||||| ||||||||||| Sbjct 97039 TCCCCGTTAAAGTCTTCACGAAGATCTGCAT 97069 Score = 113 bits (124), Expect = 4e-20 Identities = 167/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || || |||| | ||| | || ||||| | ||||||||||| || | ||| | Sbjct 96151 TTTGCATACCACCTCGAAGTCGAAGTACTAAGTGAAGGGTAGATTCCTTCTGAATGTTGT 96210 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 | ||| || |||| ||||| |||||||| || |||| || | || ||||||| Sbjct 96211 AGTCGGACAGAGTGCGTCCGTCCTCGAGCTGTTTACCCGCAAATATGAGCCTCTGCTGAT 96270 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 | || || || ||||||||||| | ||| || || || || ||| || || | | Sbjct 96271 CAGGCGGGATTCCTTCTTTGTCTTGAATCTTAGCTTTCACATTCTCGATGGTATCGGAGG 96330 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||||| || | ||||||||| || || || | ||||||||| || |||||||||| Sbjct 96331 CCTCGACCTCCAACGTGATGGTCTTCCCCGTCAAAGTTTTCACGAAAATCTGCATGC 96387 Score = 100 bits (110), Expect = 3e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| |||||||| || ||||||| | || |||||||| || ||||| |||||||| Sbjct 95546 ATCCTCGAGCTGTTTACCCGCAAAGATCAGCCTCTGCTGATCGGGTGGAATTCCTTCTTT 95605 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | ||| || |||||||| ||| ||||| | ||||| || | ||| || Sbjct 95606 GTCTTGAATCTTCGCCTTGACATTCTCGATGGTGTCGGAAGCCTCGACCTCCAACGTAAT 95665 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || ||||| || || ||||| || || || ||||||| Sbjct 95666 CGTCTTTCCGGTTAGCGTTTTGACGAAAATTTGCATGC 95703 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGGAATCCT 94856 |||||||| | |||||||| || || | || ||||| || ||| || | || | Sbjct 96405 ACCAAGTGAAGGGTAGATTCTTTCTGTATATTGTAATCAGACAAAGTACGTCCG--TCTT 96462 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | || || ||||| ||||||| | | |||||||| || || || ||||| || || | Sbjct 96463 CAAGTTGCTTTCCAGCAAAGATGAGACGCTGCTGATCGGGTGGGATCCCTTCCTTATCTT 96522 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 ||| |||||||| ||| ||| ||||| | || || || | |||||||||| Sbjct 96523 GAATCTTTGCCTTCACGTTCTCGATCGTGTCGGAAGCCTCAACTTCCAAAGTGATGGTTT 96582 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || | ||| ||||| ||||| ||||| Sbjct 96583 TCCCCGTCAAAGTCTTCACGAAGATTTGCAT 96613 >seq8311 Length=725843 Score = 114 bits (126), Expect = 1e-20 Identities = 171/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| | | || |||||||| | |||| |||| || | || || ||||| || | Sbjct 133029 AAAATCTGCATTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACTCCTTCTGGATA 132970 Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 ||||| || | ||| || || ||||| || || ||| ||||||| | | |||| Sbjct 132969 TTATAGTCAGAAAGAGTTCTGCCGTCTTCCAGTTGCTTGCCGGCAAAGATCAGACGTTGC 132910 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 |||||||||||||| || ||||| || | ||| || ||||| || | | |||||| Sbjct 132909 TGATCTGGAGGAATTCCCTCTTTATCCTGAATCTTAGCCTTTACATTTTCTATTGTGTCA 132850 Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 | ||||| |||| |||||||| || || || ||||| ||||||||||| |||||| Sbjct 132849 GAAGCTTCGACCTCAAGAGTGATGGTCTTGCCTGTGAGAGTCTTCACAAAGATTTGCATG 132790 Query 95009 CTT 95011 || Sbjct 132789 TTT 132787 Score = 111 bits (122), Expect = 1e-19 Identities = 175/250 (70%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 94760 GGTTTTTTA--AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATT 94817 || |||||| ||| | | || |||||||| | |||| |||| || | || || | Sbjct 133724 GGGTTTTTACGAAAATCTGCATTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGACT 133665 Query 94818 CCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGA 94877 | || || | |||||| || | ||| || ||| || || || || ||| | |||| Sbjct 133664 CTTTCTGGATGTTATAGTCAGAAAGAGTTCTGCCATCTTCTAGTTGCTTGCCGGCGAAGA 133605 Query 94878 TTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGC 94937 | | | ||||||||| |||||||||||||||||||| | ||||||||||| || Sbjct 133604 TCAGGCGTTGCTGATCAGGAGGAATACCTTCTTTGTCTTGTATTTTTGCCTTTACATTCT 133545 Query 94938 CGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAA 94997 | | ||||||| || || |||| |||||||| || || || || ||||| || | Sbjct 133544 CTATTGTGTCAGACGCTTCAACCTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTTACGA 133485 Query 94998 AGATCTGCAT 95007 | |||||||| Sbjct 133484 AAATCTGCAT 133475 >seq8719 Length=610 Score = 100 bits (110), Expect = 3e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 |||||||| ||||| | ||| |||||| || ||| || || || ||||| || Sbjct 172 GTAGATTCTTTTTGAATGTTGTAATCGGACAAGGTGCGTCCGTCTTCTAGTTGTTTACCC 113 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 |||||||||||||||||||||| ||||| ||||| |||||||| | ||||| ||||| Sbjct 112 GCAAAGATTAATCTTTGCTGATCGGGAGGGATACCCTCTTTGTCTTGGATTTTCGCCTTA 53 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCC 94980 || ||| ||||| | || || || | ||||||||| ||||| Sbjct 52 ACATTCTCGATGGTGTCGGATGCTTCAACCTCCAACGTGATGGTCTTTCC 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448241366829480