Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq3349 111 2e-19 seq8311 109 5e-19 seq8719 93.3 4e-14 seq2953 91.5 1e-13 seq4549 86.0 6e-12 >seq3349 Length=644485 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || ||||| || || || ||||| | ||||| | ||| | || | Sbjct 96157 ATGCAAATCTTCGTAAAGACTTTGACAGGAAAGACCATCACGTTGGAAGTCGAGGCTTCT 96098 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | |||||| |||||| ||||| ||||| || || || ||||| Sbjct 96097 GACACTATTGAAAATGTCAAAGCGAAGATTCAGGACAAGGAAGGAATCCCCCCGGATCAG 96038 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 || ||| | || | | ||| |||||||||||||||| | | |||| | | |||||||| Sbjct 96037 CAGAGATTGATCTTTGCCGGAAAACAACTCGAAGATGGTCG-CACGTTATCTGACTATAA 95979 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || |||||||| || |||||||||| || | ||| |||| || Sbjct 95978 TATCCAGAAAGAATCCACCCTCCATCTGGTGCTTCGGCTTCGAGGTGG 95931 Score = 105 bits (116), Expect = 6e-18 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || ||||| ||||| | ||||| | || | ||| || | Sbjct 95017 ATGCAGATCTTCGTGAAGACTTTAACAGGAAAGACCATCACGTTGGAGGTTGAAGCATCC 94958 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||||||| | || || || || |||||||| || || ||||||||||| Sbjct 94957 GACACCATCGAGAATGTTAAGGCGAAAATCCAAGACAAAGAGGGTATCCCTCCCGATCAG 94898 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||| | || | | || |||||||| ||||| | | | | | ||| || ||| Sbjct 94897 CAAAGATTAATCTTTGCGGGTAAACAACTAGAAGACGGACGCACCTTGTCCGATTACAAC 94838 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAAAAT 27001 ||||||||||||||||| | || || || || | || ||||| || || || Sbjct 94837 ATTCAAAAAGAATCTACGCTTCACCTTGTACTTCGTCTCAGAGGTGGCAATAT 94785 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| |||| ||||| |||| || | || | || | | Sbjct 95701 ATGCAAATTTTCGTCAAAACGCTAACCGGAAAGACGATTACGTTGGAGGTCGAGGCTTCC 95642 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||||||| | ||||| |||||| ||||||||||| || || |||||||| Sbjct 95641 GACACCATCGAGAATGTCAAGGCGAAGATTCAAGACAAAGAAGGAATTCCACCCGATCAG 95582 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || || | | || ||||| ||||| |||| | | | | || || || Sbjct 95581 CAGAGGCTGATCTTTGCGGGTAAACAGCTCGAGGATGGACGGACCCTGTCTGATTACAAT 95522 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || |||||||| || |||||||||| || ||||| |||| || Sbjct 95521 ATCCAGAAAGAATCCACCCTCCATCTGGTGCTTCGACTTCGAGGTGG 95475 Score = 102 bits (112), Expect = 8e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| | ||||||||| |||| ||| | ||| | ||| || Sbjct 96841 ATGCAGATTTTCGTCAAAACCCTGACTGGAAAAACGATTACCTTGGAAGTGGAAGCATCA 96782 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| ||| | || || || ||| ||||||||||| || || || ||||| Sbjct 96781 GACACCATTGAGAATGTGAAGGCGAAAATTCAAGACAAAGAAGGCATTCCACCTGATCAG 96722 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ACGTCAGCGACTATA 26946 || ||||| || | | || ||||| ||||| || | ||| |||| ||||| | Sbjct 96721 CAGAGACTGATCTTTGCGGGTAAACAGCTCGAGGACGGACGAACTTTGTCA--GACTACA 96664 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 | ||||| || ||||||||| | ||| |||| || ||||| | || || Sbjct 96663 ATATTCAGAAGGAATCTACTCTGCATTTGGTACTCCGACTTCGTGGCGG 96615 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| |||| ||||| |||| || | || | || | | Sbjct 95929 ATGCAAATTTTCGTCAAAACGCTAACCGGAAAGACGATTACGTTGGAGGTCGAGGCTTCC 95870 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||||||| | ||||| |||||| || |||||||| || || ||||| || Sbjct 95869 GACACCATCGAGAATGTCAAGGCGAAGATTCAAGATAAAGAAGGAATTCCACCCGACCAG 95810 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||||| || | || || ||||| ||||| |||| | | | | || || || Sbjct 95809 CAGAGACTGATCTTCGCGGGTAAACAGCTCGAGGATGGACGGACCCTGTCTGATTACAAT 95750 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || |||||||| || |||||||||| || | ||| |||| || Sbjct 95749 ATCCAGAAAGAATCCACCCTCCATCTGGTGCTTCGGCTTCGAGGTGG 95703 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || ||||| ||||| | ||||| | || | ||| || | Sbjct 95245 ATGCAGATCTTCGTGAAGACTTTAACAGGAAAGACCATCACGTTGGAGGTTGAAGCATCC 95186 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||||||| | || || || || |||||||| || || ||||||||||| Sbjct 95185 GACACCATCGAGAATGTTAAGGCGAAAATCCAAGACAAAGAGGGTATCCCTCCCGATCAG 95126 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||| | || | | || |||||||| ||||| | | | | | || || ||| Sbjct 95125 CAAAGATTAATCTTTGCGGGTAAACAACTAGAAGACGGACGCACCCTGTCTGATTACAAC 95066 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || |||||||| || | || ||||| || ||||| |||| || Sbjct 95065 ATCCAGAAAGAATCCACCCTTCACCTGGTGCTTCGACTTCGAGGTGG 95019 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || ||||| ||||| | ||||| | || | ||| || | Sbjct 95473 ATGCAGATCTTCGTGAAGACTTTAACAGGAAAGACCATCACGTTGGAGGTTGAAGCATCC 95414 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||||||| | || || || || |||||||| || || ||||||||||| Sbjct 95413 GACACCATCGAGAATGTTAAGGCGAAAATCCAAGACAAAGAGGGTATCCCTCCCGATCAG 95354 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||| | || | | || |||||||| ||||| | | | | | || || ||| Sbjct 95353 CAAAGATTAATCTTTGCGGGTAAACAACTAGAAGACGGACGCACCCTGTCTGATTACAAC 95294 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || |||||||| || | || ||||| || ||||| |||| || Sbjct 95293 ATCCAGAAAGAATCCACCCTTCACCTGGTACTTCGACTTCGAGGTGG 95247 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || ||||| || || | ||||| | || | || | | Sbjct 97069 ATGCAGATCTTCGTGAAGACTTTAACGGGGAAGACCATCACGTTGGAGGTTGAGGCTTCC 97010 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | ||||| |||||| || || ||||| || || || |||||| Sbjct 97009 GACACTATTGAAAATGTCAAGGCGAAGATTCAGGATAAGGAAGGAATCCCCCCGGATCAA 96950 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 || ||| | || | | || |||||||| ||||||| | | | ||| | | |||||||| Sbjct 96949 CAGAGATTGATCTTTGCTGGAAAACAACTTGAAGATGGTCGCA-CGTTATCCGACTATAA 96891 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||| ||||||||||| ||| | ||| |||| || Sbjct 96890 CATCCAAAAAGAATCGACTCTGCATTTGGTTCT 96858 >seq8311 Length=725843 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | || |||||||| | || || || | ||||| | || | ||| | Sbjct 133474 AATGCAGATTTTCGTAAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTTGAAGCGTC 133533 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| || ||| | || || ||| || ||||||||||| || ||||| ||||| Sbjct 133534 TGACACAATAGAGAATGTAAAGGCAAAAATACAAGACAAAGAAGGTATTCCTCCTGATCA 133593 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||| | || || | || |||||| ||||| ||||||| |||| | |||||||| Sbjct 133594 GCAACGCCTGATCTTCGCCGGCAAGCAACTAGAAGATGGCAGAACTCTTTCTGACTATAA 133653 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||| || ||||| || || | |||||||| ||| | ||| ||||||||| Sbjct 133654 CATCCAGAAAGAGTCCACACTTCATCTGGTTCTGCGTCTTCGAGGAGGAA 133703 >seq8719 Length=610 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 26796 GGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAG 26855 ||||| | ||||| | || | ||| || ||||||||||||| | || || || Sbjct 3 GGAAAGACCATCACGTTGGAGGTTGAAGCATCCGACACCATCGAGAATGTTAAGGCGAAA 62 Query 26856 ATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAA 26915 || |||||||| || || ||||||||||| |||||| | || | | || |||||| Sbjct 63 ATCCAAGACAAAGAGGGTATCCCTCCCGATCAGCAAAGATTAATCTTTGCGGGTAAACAA 122 Query 26916 CTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTG 26975 || ||||| | | | | | ||| || |||||||||||||||||||| | || || Sbjct 123 CTAGAAGACGGACGCACCTTGTCCGATTACAACATTCAAAAAGAATCTACGCTTCACCTT 182 Query 26976 GTCCTGAGACTTAGAGGAGGAAAAAT 27001 || || | || ||||| || || || Sbjct 183 GTACTTCGTCTCAGAGGTGGCAATAT 208 >seq2953 Length=1164165 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/206 (71%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 26755 TTTAGTCAAACAAA-ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATC 26813 ||||| ||||| ||||| | || || ||||| | || || || | || ||| || Sbjct 119857 TTTAGGCAAACCGTCATGCAGATTTTCGTGAAAACCCTCACGGGTAAGACAATTACCCTC 119916 Query 26814 GAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGG 26873 || ||||| || ||| |||||||| | || ||| |||||| |||||||| ||| Sbjct 119917 GAGGTAGAAGCATCCGATACCATCGAAAATGTGAAAGCTAAGATTCAAGACAAAGAGGGG 119976 Query 26874 ATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAAC 26933 || || || |||||||| |||| || | || ||||||||| | || |||| | | | Sbjct 119977 ATTCCACCAGATCAACAGCGACTGATCTTCGCCGGCAAACAGTTAGAGGATGGGCGTA-C 120035 Query 26934 GTCAGC-GACTATAACATTCAAAAAG 26958 | | | || |||||||||||||||| Sbjct 120036 TTTATCTGATTATAACATTCAAAAAG 120061 >seq4549 Length=1308415 Score = 86.0 bits (94), Expect = 6e-12 Identities = 83/104 (80%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 26870 AGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG 26929 ||| || || || |||||||||||||| || | || || |||||||| ||||||| || Sbjct 663400 AGGAATTCCACCAGATCAACAAAGACTGATCTTCGCTGGAAAACAACTGGAAGATGGGAG 663341 Query 26930 AAACGTCAGC-GACTATAACATTCAAAAAGAATCTACTATCCAT 26972 || | | | | |||||||||||||||||||| |||||| | ||| Sbjct 663340 AA-CTTTATCTGACTATAACATTCAAAAAGAGTCTACTTTACAT 663298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478609190690960